Evidence map›Paper›PMID 23755317›Full record

ArticlePLoS neglected tropical diseases2013

Plague circulation and population genetics of the reservoir Rattus rattus: the influence of topographic relief on the distribution of the disease within the Madagascan focus.

Carine Brouat, Soanandrasana Rahelinirina, Anne Loiseau, Lila Rahalison, Minoariso Rajerison, Dominique Laffly, Pascal Handschumacher, Jean-Marc Duplantier

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Human plague: An old scourge that needs new answers.PLoS neglected tropical diseases · 2020
    Review
  11. Article
  12. Plague in Zimbabwe from 1974 to 2018: A review article.PLoS neglected tropical diseases · 2019
    Review
  13. Article
  14. Article
  15. Climatic and evolutionary drivers of phase shifts in the plague epidemics of colonial India.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  16. Zoonoses As Ecological Entities: A Case Review of Plague.PLoS neglected tropical diseases · 2016
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Carine BrouatIRD, UMR022 CBGP, Montferrier-sur-Lez, France. carine.brouat@ird.fr
Soanandrasana Rahelinirina
Anne Loiseau
Lila Rahalison
Minoariso Rajerison
Dominique Laffly
Pascal Handschumacher
Jean-Marc Duplantier
Institut Pasteur de Madagascar · MGCentre de Biologie et de Gestion des Populations · FRInstitut de Recherche pour le Développement · FRUniversité de Toulouse · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLandscape may affect the distribution of infectious diseases by influencing the population density and dispersal of hosts and vectors. Plague (Yersinia pestis infection) is a highly virulent, re-emerging disease, the ecology of which has been scarcely studied in Africa. Human seroprevalence data for the major plague focus of Madagascar suggest that plague spreads heterogeneously across the landscape as a function of the relief. Plague is primarily a disease of rodents. We therefore investigated the relationship between disease distribution and the population genetic structure of the black rat, Rattus rattus, the main reservoir of plague in Madagascar. METHODOLOGY/PRINCIPAL

findingsWe conducted a comparative study of plague seroprevalence and genetic structure (15 microsatellite markers) in rat populations from four geographic areas differing in topology, each covering about 150-200 km(2) within the Madagascan plague focus. The seroprevalence levels in the rat populations mimicked those previously reported for humans. As expected, rat populations clearly displayed a more marked genetic structure with increasing relief. However, the relationship between seroprevalence data and genetic structure differs between areas, suggesting that plague distribution is not related everywhere to the effective dispersal of rats. CONCLUSIONS/SIGNIFICANCE: Genetic diversity estimates suggested that plague epizootics had only a weak impact on rat population sizes. In the highlands of Madagascar, plague dissemination cannot be accounted for solely by the effective dispersal of the reservoir. Human social activities may also be involved in spreading the disease in rat and human populations.

Indexed as

Genetic VariationTopography, MedicalAnimalsGenetics, PopulationMadagascarPlaguePopulation DensityRatsRodent DiseasesSeroepidemiologic StudiesYersinia pestis

Identifiers

PMID23755317
PMCPMC3674990
OpenAlexW1970506897

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.