Evidence map›Paper›PMID 23755305›Full record

ArticlePloS one2013

Suppression of gluconeogenic gene expression by LSD1-mediated histone demethylation.

Dongning Pan, Chunxiao Mao, Yong-Xu Wang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
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  4. Role of NADCellular and molecular neurobiology · 2023
    Review
  5. Metabolism as a New Avenue for Hepatocellular Carcinoma Therapy.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
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  15. Article
  16. Review
  17. Review
  18. Metabolic and Epigenetic Action Mechanisms of Antidiabetic Medicinal Plants.Evidence-based complementary and alternative medicine : eCAM · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dongning PanProgram in Gene Function and Expression and Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Chunxiao Mao
Yong-Xu Wang
University of Massachusetts Chan Medical School · US

Funding

PILOT AND FEASIBILITY PROGRAMP30DK032520 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CZECH, MICHAEL P · 1986 to 2010
$14.6M
Regulation of brown fat metabolism by histone demethylationR01DK076118 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WANG, YONG-XU · 2008 to 2016
$3.1M
NIDDK NIH HHS P30 DK032520NIDDK NIH HHS R01 DK076118NIDDK NIH HHS R01DK076118
6 · The paper itself

Abstract

Aberrant gluconeogenic gene expression is associated with diabetes, glycogen storage disease, and liver cancer. However, little is known how these genes are regulated at the chromatin level. In this study, we investigated in HepG2 cells whether histone demethylation is a potential mechanism. We found that knockdown or pharmacological inhibition of histone demethylase LSD1 causes remarkable transcription activation of two gluconeogenic genes, FBP1 and G6Pase, and consequently leads to increased de novo glucose synthesis and decreased intracellular glycogen content. Mechanistically, LSD1 occupies the promoters of FBP1 and G6Pase, and modulates their H3K4 dimethylation levels. Thus, our work identifies an epigenetic pathway directly governing gluconeogenic gene expression, which might have important implications in metabolic physiology and diseases.

Indexed as

Epigenesis, GeneticProtein Processing, Post-TranslationalDNA-Binding ProteinsDNA HelicasesGene ExpressionGene Knockdown TechniquesGluconeogenesisGlucoseGlucose-6-PhosphataseHep G2 CellsHistone DemethylasesHistonesHumansMethylationPromoter Regions, GeneticRNA-Binding ProteinsDNA-Binding ProteinsDNA HelicasesFUBP1 protein, humanGlucoseGlucose-6-PhosphataseHistone DemethylasesHistonesKDM1A protein, humanRNA-Binding ProteinsTranylcypromine

Identifiers

PMID23755305
PMCPMC3673910
OpenAlexW2013485159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.