Evidence map›Paper›PMID 23754435›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

APE2 is required for ATR-Chk1 checkpoint activation in response to oxidative stress.

Jeremy Willis, Yogin Patel, Barry L Lentz, Shan Yan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 103 citations in OpenAlex.

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  11. Key molecular DNA damage responses of human cells to radiation.Frontiers in cell and developmental biology · 2024
    Review
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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jeremy WillisDepartment of Biology, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
Yogin Patel
Barry L Lentz
Shan Yan
University of North Carolina at Charlotte · US

Funding

Role of TopBP1 partner WDR18 in DNA damage checkpoint and DNA replicationR15GM101571 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI YAN, SHAN · 2012 to 2012
$297k
NIGMS NIH HHS R15 GM101571
6 · The paper itself

Abstract

The base excision repair pathway is largely responsible for the repair of oxidative stress-induced DNA damage. However, it remains unclear how the DNA damage checkpoint is activated by oxidative stress at the molecular level. Here, we provide evidence showing that hydrogen peroxide (H2O2) triggers checkpoint kinase 1 (Chk1) phosphorylation in an ATR [ataxia-telangiectasia mutated (ATM) and Rad3-related]-dependent but ATM-independent manner in Xenopus egg extracts. A base excision repair protein, Apurinic/apyrimidinic (AP) endonuclease 2 (APE2, APN2, or APEX2), is required for the generation of replication protein A (RPA)-bound single-stranded DNA, the recruitment of a checkpoint protein complex [ATR, ATR-interacting protein (ATRIP), and Rad9] to damage sites, and H2O2-induced Chk1 phosphorylation. A conserved proliferating cell nuclear antigen interaction protein box of APE2 is important for the recruitment of APE2 to H2O2-damaged chromatin. APE2 3'-phosphodiesterase and 3'-5' exonuclease activity is essential for single-stranded DNA generation in the 3'-5' direction from single-stranded breaks, referred to as single-stranded break end resection. In addition, APE2 associates with Chk1, and a serine residue (S86) in the Chk1-binding motif of APE2 is essential for Chk1 phosphorylation, indicating a Claspin-like but distinct role for APE2 in ATR-Chk1 signaling. Our data indicate that APE2 plays a vital and previously unexpected role in ATR-Chk1 checkpoint signaling in response to oxidative stress. Thus, our findings shed light on a distinct mechanism of how an ATR-Chk1-dependent DNA damage checkpoint is mediated by APE2 in the oxidative stress response.

Indexed as

Amino Acid SequenceAnimalsAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsCell-Free SystemCheckpoint Kinase 1DNA-(Apurinic or Apyrimidinic Site) LyaseDNA DamageDNA RepairDNA, Single-StrandedFemaleHydrogen PeroxideMolecular Sequence DataOvumOxidative StressPhosphorylationAtaxia Telangiectasia Mutated ProteinsAtr protein, XenopusCell Cycle ProteinsCheckpoint Kinase 1Chek1 protein, XenopusDNA-(Apurinic or Apyrimidinic Site) LyaseDNA, Single-StrandedHydrogen PeroxideProtein KinasesProtein Serine-Threonine KinasesRecombinant ProteinsXenopus Proteins

Identifiers

PMID23754435
PMCPMC3696815
OpenAlexW2011777722

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.