Evidence map›Paper›PMID 23752511›Full record

ArticleAntimicrobial agents and chemotherapy2013

Distinction between the Cfr methyltransferase conferring antibiotic resistance and the housekeeping RlmN methyltransferase.

Gemma C Atkinson, Lykke H Hansen, Tanel Tenson, Anette Rasmussen, Finn Kirpekar, Birte Vester

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  8. Unravelling Antimicrobial Resistance inVeterinary sciences · 2024
    Review
  9. Article
  10. Article
  11. CNature communications · 2024
    Article
  12. Article
  13. Article
  14. Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Gemma C AtkinsonInstitute of Technology, University of Tartu, Tartu, Estonia.
Lykke H Hansen
Tanel Tenson
Anette Rasmussen
Finn Kirpekar
Birte Vester
University of Southern Denmark · DKUniversity of Tartu · EEKlinik Schützen Rheinfelden · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cfr gene encodes the Cfr methyltransferase that primarily methylates C-8 in A2503 of 23S rRNA in the peptidyl transferase region of bacterial ribosomes. The methylation provides resistance to six classes of antibiotics of clinical and veterinary importance. The rlmN gene encodes the RlmN methyltransferase that methylates C-2 in A2503 in 23S rRNA and A37 in tRNA, but RlmN does not significantly influence antibiotic resistance. The enzymes are homologous and use the same mechanism involving radical S-adenosyl methionine to methylate RNA via an intermediate involving a methylated cysteine in the enzyme and a transient cross-linking to the RNA, but they differ in which carbon atom in the adenine they methylate. Comparative sequence analysis identifies differentially conserved residues that indicate functional sequence divergence between the two classes of Cfr- and RlmN-like sequences. The differentiation between the two classes is supported by previous and new experimental evidence from antibiotic resistance, primer extensions, and mass spectrometry. Finally, evolutionary aspects of the distribution of Cfr- and RlmN-like enzymes are discussed.

Indexed as

Amino Acid SequenceBacterial ProteinsConsensus SequenceDatabases, ProteinDrug Resistance, BacterialDrug Resistance, MicrobialEscherichia coliEscherichia coli ProteinsGenes, BacterialGenetic VariationMethylationMethyltransferasesMicrobial Sensitivity TestsMolecular Sequence DataPhylogenyPlasmidsBacterial ProteinsCFR protein, Staphylococcus sciuriEscherichia coli ProteinsMethyltransferasesRlmN protein, E coliRNA, BacterialRNA, Ribosomal, 23S

Identifiers

PMID23752511
PMCPMC3719738
OpenAlexW2074379574

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.