Evidence map›Paper›PMID 23752505›Full record

ArticleAntimicrobial agents and chemotherapy2013

The griffithsin dimer is required for high-potency inhibition of HIV-1: evidence for manipulation of the structure of gp120 as part of the griffithsin dimer mechanism.

Jie Xue, Bart Hoorelbeke, Ioannis Kagiampakis, Borries Demeler, Jan Balzarini, Patricia J Liwang

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  9. Lectins and lectibodies: potential promising antiviral agents.Cellular & molecular biology letters · 2022
    Review
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  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Low-Cost, Large-Scale Production of the Anti-viral Lectin Griffithsin.Frontiers in bioengineering and biotechnology · 2020
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Jie XueUniversity of California, Merced, Merced, California, USA.
Bart Hoorelbeke
Ioannis Kagiampakis
Borries Demeler
Jan Balzarini
Patricia J Liwang
University of California, Merced · USKU Leuven · BERega Institute for Medical Research · BEThe University of Texas Health Science Center at San Antonio · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
Center of Excellence on Health Disparities in the Ethnic and Rural UnderservedP20MD005049 · NIMHD · UNIVERSITY OF CALIFORNIA, MERCED · PI WALLANDER, JAN L · 2009 to 2010
$1.3M
Combinations of entry inhibitors as anti HIV-1 microbicidesR21AI079777 · NIAID · UNIVERSITY OF CALIFORNIA, MERCED · PI LIWANG, PATRICIA J · 2008 to 2009
$407k
NCI NIH HHS NCI P30 CA054174NCI NIH HHS P30 CA054174NIAID NIH HHS R21 AI079777NIMHD NIH HHS 1P20MD005049-01NIMHD NIH HHS P20 MD005049
6 · The paper itself

Abstract

Griffithsin (Grft) is a protein lectin derived from red algae that tightly binds the HIV envelope protein gp120 and effectively inhibits virus infection. This inhibition is due to the binding by Grft of high-mannose saccharides on the surface of gp120. Grft has been shown to be a tight dimer, but the role of the dimer in Grft's anti-HIV function has not been fully explored. To investigate the role of the Grft dimer in anti-HIV function, an obligate dimer of Grft was designed by expressing the protein with a peptide linker between the two subunits. This "Grft-linker-Grft" is a folded protein dimer, apparently nearly identical in structural properties to the wild-type protein. A "one-armed" obligate dimer was also designed (Grft-linker-Grft OneArm), with each of the three carbohydrate binding sites of one subunit mutated while the other subunit remained intact. While both constructed dimers retained the ability to bind gp120 and the viral surface, Grft-linker-Grft OneArm was 84- to 1,010-fold less able to inhibit HIV than wild-type Grft, while Grft-linker-Grft had near-wild-type antiviral potency. Furthermore, while the wild-type protein demonstrated the ability to alter the structure of gp120 by exposing the CD4 binding site, Grft-linker-Grft OneArm largely lost this ability. In experiments to investigate gp120 shedding, it was found that Grft has different effects on gp120 shedding for strains from subtype B and subtype C, and this might correlate with Grft function. Evidence is provided that the dimer form of Grft is critical to the function of this protein in HIV inhibition.

Indexed as

Anti-HIV AgentsBinding SitesCD4 AntigensCell Line, TumorHIV-1HIV Envelope Protein gp120HumansPlant LectinsProtein BindingProtein ConformationProtein MultimerizationReceptors, HIVVirus InternalizationVirus SheddingAnti-HIV AgentsCD4 Antigensgriffithsin protein, GriffithsiaHIV Envelope Protein gp120Plant LectinsReceptors, HIV

Identifiers

PMID23752505
PMCPMC3719714
OpenAlexW2121528674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.