Evidence map›Paper›PMID 23750223›Full record

ArticlePloS one2013

Quantitative trait loci (QTL) associated with resistance to a monogenean parasite (Benedenia seriolae) in yellowtail (Seriola quinqueradiata) through genome wide analysis.

Akiyuki Ozaki, Kazunori Yoshida, Kanako Fuji, Satoshi Kubota, Wataru Kai, Jun-ya Aoki, Yumi Kawabata, Junpei Suzuki, Kazuki Akita, Takashi Koyama and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. The yellowtail (Seriola quinqueradiata) genome and transcriptome atlas of the digestive tract.DNA research : an international journal for rapid publication of reports on genes and genomes · 2018
    Article
  8. Teleosts Genomics: Progress and Prospects in Disease Prevention and Control.International journal of molecular sciences · 2018
    Review
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  10. Article
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  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Akiyuki OzakiNational Research Institute of Aquaculture, Fisheries Research Agency, Nakatsuhamaura, Minamiise-cho, Watarai-gun, Mie, Japan. aozaki@affrc.go.jp
Kazunori Yoshida
Kanako Fuji
Satoshi Kubota
Wataru Kai
Jun-ya Aoki
Yumi Kawabata
Junpei Suzuki
Kazuki Akita
Takashi Koyama
Masahiro Nakagawa
Takurou Hotta
Tatsuo Tsuzaki
Nobuaki Okamoto
Kazuo Araki
Takashi Sakamoto
Japan Fisheries Research and Education Agency · JPTokyo University of Marine Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Benedenia infections caused by the monogenean fluke ectoparasite Benedenia seriolae seriously impact marine finfish aquaculture. Genetic variation has been inferred to play a significant role in determining the susceptibility to this parasitic disease. To evaluate the genetic basis of Benedenia disease resistance in yellowtail (Seriola quinqueradiata), a genome-wide and chromosome-wide linkage analyses were initiated using F1 yellowtail families (n = 90 per family) based on a high-density linkage map with 860 microsatellite and 142 single nucleotide polymorphism (SNP) markers. Two major quantitative trait loci (QTL) regions on linkage groups Squ2 (BDR-1) and Squ20 (BDR-2) were identified. These QTL regions explained 32.9-35.5% of the phenotypic variance. On the other hand, we investigated the relationship between QTL for susceptibility to B. seriolae and QTL for fish body size. The QTL related to growth was found on another linkage group (Squ7). As a result, this is the first genetic evidence that contributes to detailing phenotypic resistance to Benedenia disease, and the results will help resolve the mechanism of resistance to this important parasitic infection of yellowtail.

Indexed as

GenomicsQuantitative Trait LociAnimalsBody SizeChromosome MappingChromosomesDisease ResistanceFish DiseasesFishesHost-Pathogen InteractionsMicrosatellite RepeatsPhenotypePlatyhelminthsPolymorphism, Single Nucleotide

Identifiers

PMID23750223
PMCPMC3672171
OpenAlexW2032869024

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.