Evidence map›Paper›PMID 23749810›Full record

ArticlePlant & cell physiology2013

Photosynthesis of root chloroplasts developed in Arabidopsis lines overexpressing GOLDEN2-LIKE transcription factors.

Koichi Kobayashi, Daichi Sasaki, Ko Noguchi, Daiki Fujinuma, Hirohisa Komatsu, Masami Kobayashi, Mayuko Sato, Kiminori Toyooka, Keiko Sugimoto, Krishna K Niyogi and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Plants (Basel, Switzerland) · 2025
    Article
  11. Review
  12. Article
  13. CaBMC plant biology · 2025
    Article
  14. Article
  15. Reference based transcriptome assembly ofFrontiers in plant science · 2025
    Article
  16. Article
  17. Article
  18. Overexpression ofInternational journal of molecular sciences · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Koichi KobayashiGraduate School of Arts and Sciences, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan.
Daichi Sasaki
Ko Noguchi
Daiki Fujinuma
Hirohisa Komatsu
Masami Kobayashi
Mayuko Sato
Kiminori Toyooka
Keiko Sugimoto
Krishna K Niyogi
Hajime Wada
Tatsuru Masuda
Tokyo Metropolitan Komaba High School · JPRIKEN Center for Sustainable Resource Science · JPUniversity of Tsukuba · JPHoward Hughes Medical Institute · USThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants, genes involved in photosynthesis are encoded separately in nuclei and plastids, and tight cooperation between these two genomes is therefore required for the development of functional chloroplasts. Golden2-like (GLK) transcription factors are involved in chloroplast development, directly targeting photosynthesis-associated nuclear genes for up-regulation. Although overexpression of GLKs leads to chloroplast development in non-photosynthetic organs, the mechanisms of coordination between the nuclear gene expression influenced by GLKs and the photosynthetic processes inside chloroplasts are largely unknown. To elucidate the impact of GLK-induced expression of photosynthesis-associated nuclear genes on the construction of photosynthetic systems, chloroplast morphology and photosynthetic characteristics in greenish roots of Arabidopsis thaliana lines overexpressing GLKs were compared with those in wild-type roots and leaves. Overexpression of GLKs caused up-regulation of not only their direct targets but also non-target nuclear and plastid genes, leading to global induction of chloroplast biogenesis in the root. Large antennae relative to reaction centers were observed in wild-type roots and were further enhanced by GLK overexpression due to the increased expression of target genes associated with peripheral light-harvesting antennae. Photochemical efficiency was lower in the root chloroplasts than in leaf chloroplasts, suggesting that the imbalance in the photosynthetic machinery decreases the efficiency of light utilization in root chloroplasts. Despite the low photochemical efficiency, root photosynthesis contributed to carbon assimilation in Arabidopsis. Moreover, GLK overexpression increased CO₂ fixation and promoted phototrophic performance of the root, showing the potential of root photosynthesis to improve effective carbon utilization in plants.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsCarbon DioxideChloroplastsLightOxygenPhotosynthesisPigments, BiologicalPlant LeavesPlant RootsSeedlingsTranscription FactorsUp-RegulationArabidopsis ProteinsCarbon DioxideGLK1 protein, ArabidopsisGLK2 protein, ArabidopsisOxygenPigments, BiologicalTranscription FactorsArabidopsis rootChloroplast developmentConstruction of photosynthetic systemsGLKPhotosynthesis

Identifiers

PMID23749810
PMCPMC3730084
OpenAlexW2151510975

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.