Evidence map›Paper›PMID 23749187›Full record

ArticleNature genetics2013

Identification of multiple risk variants for ankylosing spondylitis through high-density genotyping of immune-related loci.

International Genetics of Ankylosing Spondylitis Consortium (IGAS), Adrian Cortes, Johanna Hadler, Jenny P Pointon, Philip C Robinson, Tugce Karaderi, Paul Leo, Katie Cremin, Karena Pryce, Jessica Harris and 61 more

Abstract read
In one paragraph

Article in Nature genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 493 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
493citing papers in PubMed, 8 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

493 citing papers in PubMed, 8 syntheses or guidelines pooled it.

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433 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

71 authors.

International Genetics of Ankylosing Spondylitis Consortium (IGAS)University of Queensland Diamantina Institute, Translational Research Institute, Brisbane, Queensland, Australia.
Adrian Cortes
Johanna Hadler
Jenny P Pointon
Philip C Robinson
Tugce Karaderi
Paul Leo
Katie Cremin
Karena Pryce
Jessica Harris
Seunghun Lee
Kyung Bin Joo
Seung-Cheol Shim
Michael Weisman
Michael Ward
Xiaodong Zhou
Henri-Jean Garchon
Gilles Chiocchia
Johannes Nossent
Benedicte A Lie
Øystein Førre
Jaakko Tuomilehto
Kari Laiho
Lei Jiang
Yu Liu
Xin Wu
Linda A Bradbury
Dirk Elewaut
Ruben Burgos-Vargas
Simon Stebbings
Louise Appleton
Claire Farrah
Jonathan Lau
Tony J Kenna
Nigil Haroon
Manuel A Ferreira
Jian Yang
Juan Mulero
Jose Luis Fernandez-Sueiro
Miguel A Gonzalez-Gay
Carlos Lopez-Larrea
Panos Deloukas
Peter Donnelly
Australo-Anglo-American Spondyloarthritis Consortium (TASC)
Groupe Française d'Etude Génétique des Spondylarthrites (GFEGS)
Nord-Trøndelag Health Study (HUNT)
Spondyloarthritis Research Consortium of Canada (SPARCC)
Wellcome Trust Case Control Consortium 2 (WTCCC2)
Paul Bowness
Karl Gafney
Hill Gaston
Dafna D Gladman
Proton Rahman
Walter P Maksymowych
Huji Xu
J Bart A Crusius
Irene E van der Horst-Bruinsma
Chung-Tei Chou
Raphael Valle-Oñate
Consuelo Romero-Sánchez
Inger Myrnes Hansen
Fernando M Pimentel-Santos
Robert D Inman
Vibeke Videm
Javier Martin
Maxime Breban
John D Reveille
David M Evans
Tae-Hwan Kim
Bryan Paul Wordsworth
Matthew A Brown

Funding

ZONA-FREE HAMSTER OVA ASSAY AS AN INDICATOR OF MALE FERTILITYM01RR000425 · NCRR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI WANG, CHRISTINA C. · 1985 to 2011
$74.2M
The Genetic Basis of AS SusceptibilityP01AR052915 · NIAMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI REVEILLE, JOHN DUFFIN · 2006 to 2016
$10.9M
FAMILY STUDIES OF THE GENETICS OF ANKYLOSING SPONDYLITISR01AR046208 · NIAMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI REVEILLE, JOHN DUFFIN · 1999 to 2003
$4.2M
Studies of HLA Region Genomics in Systemic Sclerosis and Ankylosing SpondyilitisU01AI090909 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MAYES, MAUREEN MAUREEN, REVEILLE, JOHN DUFFIN · 2010 to 2014
$2.9M
Arthritis Research UK 18797Arthritis Research UK 19536Intramural NIH HHSMedical Research Council G0000934NCRR NIH HHS M01 RR000425NCRR NIH HHS UL1RR024188NIAID NIH HHS U01 AI090909NIAMS NIH HHS P01 AR052915NIAMS NIH HHS R01 AR046208NIAMS NIH HHS R01-AR046208Versus Arthritis 19356Wellcome Trust 068545/Z/02Wellcome Trust 083948/Z/07/ZWellcome Trust 090532Wellcome Trust 095552
6 · The paper itself

Abstract

Ankylosing spondylitis is a common, highly heritable inflammatory arthritis affecting primarily the spine and pelvis. In addition to HLA-B*27 alleles, 12 loci have previously been identified that are associated with ankylosing spondylitis in populations of European ancestry, and 2 associated loci have been identified in Asians. In this study, we used the Illumina Immunochip microarray to perform a case-control association study involving 10,619 individuals with ankylosing spondylitis (cases) and 15,145 controls. We identified 13 new risk loci and 12 additional ankylosing spondylitis-associated haplotypes at 11 loci. Two ankylosing spondylitis-associated regions have now been identified encoding four aminopeptidases that are involved in peptide processing before major histocompatibility complex (MHC) class I presentation. Protective variants at two of these loci are associated both with reduced aminopeptidase function and with MHC class I cell surface expression.

Indexed as

Genetic LociPolymorphism, Single NucleotideAllelesCase-Control StudiesDNA Mutational AnalysisGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeGenotyping TechniquesHigh-Throughput Nucleotide SequencingHLA-B27 AntigenHumansImmune System PhenomenaRisk FactorsSpondylitis, AnkylosingHLA-B27 Antigen

Identifiers

PMID23749187
PMCPMC3757343

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.