Evidence map›Paper›PMID 23748379›Full record

ArticleNature structural & molecular biology2013

A bacterial-like mechanism for transcription termination by the Sen1p helicase in budding yeast.

Odil Porrua, Domenico Libri

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Article in Nature structural & molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 133 citations in OpenAlex.

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  12. Toward structural understanding of eukaryotic transcription elongation.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2025
    Review
  13. Article
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  17. Polyadenylated versions of small non-coding RNAs inMicrobial cell (Graz, Austria) · 2024
    Article
  18. Review
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Odil PorruaCentre de Génétique Moléculaire, Centre National de la Recherche Scientifique, Gif sur Yvette, France. porrua-f@cgm.cnrs-gif.fr
Domenico Libri
Centre de Génétique Moléculaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription termination is essential to generate functional RNAs and to prevent disruptive polymerase collisions resulting from concurrent transcription. The yeast Sen1p helicase is involved in termination of most noncoding RNAs transcribed by RNA polymerase II (RNAPII). However, the mechanism of termination and the role of this protein have remained enigmatic. Here we address the mechanism of Sen1p-dependent termination by using a highly purified in vitro system. We show that Sen1p is the key enzyme of the termination reaction and reveal features of the termination mechanism. Like the bacterial termination factor Rho, Sen1p recognizes the nascent RNA and hydrolyzes ATP to dissociate the elongation complex. Sen1p-dependent termination is highly specific and, notably, does not require the C-terminal domain of RNAPII. We also show that termination is inhibited by RNA-DNA hybrids. Our results elucidate the role of Sen1p in controlling pervasive transcription.

Indexed as

Transcription Termination, GeneticAdenosine TriphosphateBase SequenceDNA-Binding ProteinsDNA HelicasesModels, GeneticMolecular Sequence DataMultiprotein ComplexesNuclear ProteinsProtein Structure, TertiaryRNA-Binding ProteinsRNA, FungalRNA HelicasesRNA Polymerase IIRNA PrecursorsRNA, Small NucleolarAdenosine TriphosphateDNA-Binding ProteinsDNA HelicasesMultiprotein ComplexesNAB3 protein, S cerevisiaeNRD1 protein, S cerevisiaeNuclear ProteinsREB1 protein, S cerevisiaeRNA-Binding ProteinsRNA, FungalRNA HelicasesRNA Polymerase IIRNA PrecursorsRNA, Small NucleolarSaccharomyces cerevisiae ProteinsSEN1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID23748379
OpenAlexW2000119161

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.