Evidence map›Paper›PMID 23748164›Full record

ArticleAging2013

FOXO1 regulates expression of a microRNA cluster on X chromosome.

Ruchi Singhal, Jonathan E Bard, Norma J Nowak, Michael J Buck, Eugene S Kandel

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Non-Epithelial Ovarian Cancers: How Much Do We Really Know?International journal of environmental research and public health · 2022
    Review
  6. FoxO transcription factors 1 regulate mouse preimplantation embryo development.Journal of assisted reproduction and genetics · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Sexual dimorphism in cancer.Nature reviews. Cancer · 2016
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ruchi SinghalDepartment of Cell Stress Biology, Roswell Park Cancer Institute, BLSC L3-318, Buffalo, NY 14263, USA.
Jonathan E Bard
Norma J Nowak
Michael J Buck
Eugene S Kandel
Center for Excellence in Education · USRoswell Park Comprehensive Cancer Center · US

Funding

Genetic Determinants of Akt-induced TransformationK01CA098176 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI KANDEL, EUGENE S · 2005 to 2009
$641k
NCI NIH HHS 1K01CA098176NCI NIH HHS K01 CA098176
6 · The paper itself

Abstract

Phosphoinositol-3-kinase (PI3K) pathway is a crucial modulator of many physiological and pathophysiological phenomena, including aging, diabetes and cancer. Protein kinase Akt, a downstream effector of PI3K, controls a plethora of cellular functions, including gene transcription. A key mechanism connecting Akt activity to changes in gene expression is inhibitory phosphorylation of FOXO family of transcription factors. Accordingly, altered expression of FOXO targets may account for many biological consequences of PI3K/Akt signaling. While the previous efforts focused on FOXO-dependent regulation of protein-coding genes, non-coding RNA genes have emerged as equally important targets of many transcription factors. Therefore, we utilized a regulated form of FOXO1 to profile FOXO1-dependent changes in miRNA expression in human cells. Both microarray hybridization and next-generation sequencing revealed changes in the products of a miRNA cluster on X chromosome. Rapid induction of these miRNAs occurred independently of de novo protein synthesis. Furthermore, inhibition of PI3K in cancer cell lines caused derepression of these miRNAs, as would be expected for FOXO-regulated genes. Members of the major oncogenic cascades are significantly overrepresented among the predicted targets of the miRNAs, consistent with tumor-suppressive role of FOXO1. The discovered miRNAs represent new candidate mediators of FOXO1 functions and possible biomarkers of its activity.

Indexed as

Chromosomes, Human, XForkhead Box Protein O1Forkhead Transcription FactorsGene Expression RegulationHEK293 CellsHumansMicroRNAsOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionTranscriptomeForkhead Box Protein O1Forkhead Transcription FactorsFOXO1 protein, humanMicroRNAs

Identifiers

PMID23748164
PMCPMC3701110
OpenAlexW2110118770

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.