Evidence map›Paper›PMID 23747706›Full record

ArticleApplied and environmental microbiology2013

Broad distribution of diverse anaerobic ammonium-oxidizing bacteria in chinese agricultural soils.

Li-Dong Shen, Shuai Liu, Li-Ping Lou, Wei-Ping Liu, Xiang-Yang Xu, Ping Zheng, Bao-Lan Hu

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Microbial Biogeochemical Cycling of Nitrogen in Arid Ecosystems.Microbiology and molecular biology reviews : MMBR · 2022
    Review
  3. Article
  4. Anaerobic Ammonium Oxidation Bacteria in a Freshwater Recirculating Pond Aquaculture System.International journal of environmental research and public health · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Anaerobic Ammonium Oxidation in Acidic Red Soils.Frontiers in microbiology · 2018
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Evidence for anaerobic ammonium oxidation process in freshwater sediments of aquaculture ponds.Environmental science and pollution research international · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Li-Dong ShenDepartment of Environmental Engineering, Zhejiang University, Hangzhou, China.
Shuai Liu
Li-Ping Lou
Wei-Ping Liu
Xiang-Yang Xu
Ping Zheng
Bao-Lan Hu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anaerobic ammonium-oxidizing (anammox) bacteria have been detected in many marine and freshwater ecosystems. However, little is known about the distribution, diversity, and abundance of anammox bacteria in terrestrial ecosystems. In this study, anammox bacteria were found to be present in various agricultural soils collected from 32 different locations in China. Phylogenetic analysis of the 16S rRNA genes showed "Candidatus Brocadia," "Candidatus Kuenenia," "Candidatus Anammoxoglobus," and "Candidatus Jettenia" in the collected soils, with "Candidatus Brocadia" being the dominant genus. Quantitative PCR showed that the abundance of anammox bacteria ranged from 6.38 × 10(4) ± 0.42 × 10(4) to 3.69 × 10(6) ± 0.25 × 10(6) copies per gram of dry weight. Different levels of diversity, composition, and abundance of the anammox bacterial communities were observed, and redundancy analysis indicated that the soil organic content and the distribution of anammox communities were correlated in the soils examined. Furthermore, Pearson correlation analysis showed that the diversity of the anammox bacteria was positively correlated with the soil ammonium content and the organic content, while the anammox bacterial abundance was positively correlated with the soil ammonium content. These results demonstrate the broad distribution of diverse anammox bacteria and its correlation with the soil environmental conditions within an extensive range of Chinese agricultural soils.

Indexed as

BiodiversitySoil MicrobiologyAmmonium CompoundsBacteria, AnaerobicBacterial LoadChinaCluster AnalysisDNA, BacterialDNA, RibosomalMolecular Sequence DataOxidation-ReductionPhylogenyReal-Time Polymerase Chain ReactionRNA, Ribosomal, 16SSequence Analysis, DNAAmmonium CompoundsDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID23747706
PMCPMC3811364

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.