Evidence map›Paper›PMID 23747543›Full record

ArticleDevelopmental biology2013

The ascl1a and dlx genes have a regulatory role in the development of GABAergic interneurons in the zebrafish diencephalon.

Ryan B MacDonald, Jacob N Pollack, Mélanie Debiais-Thibaud, Eglantine Heude, Jared Coffin Talbot, Marc Ekker

Abstract read
In one paragraph

Article in Developmental biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 30 citations in OpenAlex.

  1. Harnessing Intelligence from Brain Cells In Vitro.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2025
    Review
  2. Abamectin Causes Neurotoxicity in Zebrafish Embryos.International journal of molecular sciences · 2025
    Article
  3. Gsx2, but not Gsx1, is necessary for early forebrain patterning and long-term survival in zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Article
  4. Review
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  15. Patterning, specification, and differentiation in the developing hypothalamus.Wiley interdisciplinary reviews. Developmental biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ryan B MacDonaldCenter for Advanced Research in Environmental Genomics, Department of Biology, University of Ottawa, Ottawa, ON, Canada, K1N 6N5.
Jacob N Pollack
Mélanie Debiais-Thibaud
Eglantine Heude
Jared Coffin Talbot
Marc Ekker
University of Ottawa · CAUniversity of Oregon · US

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
CRANIOFACIAL MORPHOGENESIS IN ZEBRAFISHR01DE013834 · NIDCR · UNIVERSITY OF OREGON · PI KIMMEL, CHARLES B · 2000 to 2014
$6.9M
CIHR MOP14460NICHD NIH HHS P01 HD022486NICHD NIH HHS P01HD22486NIDCR NIH HHS R01 DE013834NIDCR NIH HHS R01DE13834
6 · The paper itself

Abstract

During development of the mouse forebrain interneurons, the Dlx genes play a key role in a gene regulatory network (GRN) that leads to the GABAergic phenotype. Here, we have examined the regulatory relationships between the ascl1a, dlx, and gad1b genes in the zebrafish forebrain. Expression of ascl1a overlaps with dlx1a in the telencephalon and diencephalon during early forebrain development. The loss of Ascl1a function results in a loss of dlx expression, and subsequent losses of dlx5a and gad1b expression in the diencephalic prethalamus and hypothalamus. Loss of Dlx1a and Dlx2a function, and, to a lesser extent, of Dlx5a and Dlx6a, impairs gad1b expression in the prethalamus and hypothalamus. We conclude that dlx1a/2a act downstream of ascl1a but upstream of dlx5a/dlx6a and gad1b to activate GABAergic specification. This pathway is conserved in the diencephalon, but has diverged between mammals and teleosts in the telencephalon.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBasic Helix-Loop-Helix ProteinsDiencephalonGABAergic NeuronsGene Expression ProfilingGene Regulatory NetworksGlutamate DecarboxylaseHomeodomain ProteinsHypothalamusInterneuronsMutationPhenotypeTelencephalonTranscription FactorsZebrafishAscl1a protein, zebrafishBasic Helix-Loop-Helix ProteinsDistal-less homeobox proteinsGlutamate Decarboxylaseglutamate decarboxylase 1Homeodomain ProteinsTranscription FactorsZebrafish Proteinsascl1aDiencephalondlxGABAergic interneurongad1bTelencephalon

Identifiers

PMID23747543
PMCPMC3750962
OpenAlexW1996879710

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.