Evidence map›Paper›PMID 23746516›Full record

ArticleBiophysical journal2013

Membrane modulates affinity for calcium ion to create an apparent cooperative binding response by annexin a5.

Jacob W Gauer, Kristofer J Knutson, Samantha R Jaworski, Anne M Rice, Anika M Rannikko, Barry R Lentz, Anne Hinderliter

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jacob W GauerDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Kristofer J Knutson
Samantha R Jaworski
Anne M Rice
Anika M Rannikko
Barry R Lentz
Anne Hinderliter
University of Minnesota, Duluth · USUniversity of North Carolina at Chapel Hill · US

Funding

Annexins and Membrane OrganizationR15GM064443 · NIGMS · UNIVERSITY OF MINNESOTA DULUTH · PI HINDERLITER, ANNE · 2002 to 2009
$642k
NIGMS NIH HHS GM64443NIGMS NIH HHS R15 GM064443
6 · The paper itself

Abstract

Isothermal titration calorimetry was used to characterize the binding of calcium ion (Ca²⁺) and phospholipid to the peripheral membrane-binding protein annexin a5. The phospholipid was a binary mixture of a neutral and an acidic phospholipid, specifically phosphatidylcholine and phosphatidylserine in the form of large unilamellar vesicles. To stringently define the mode of binding, a global fit of data collected in the presence and absence of membrane concentrations exceeding protein saturation was performed. A partition function defined the contribution of all heat-evolving or heat-absorbing binding states. We find that annexin a5 binds Ca²⁺ in solution according to a simple independent-site model (solution-state affinity). In the presence of phosphatidylserine-containing liposomes, binding of Ca²⁺ differentiates into two classes of sites, both of which have higher affinity compared with the solution-state affinity. As in the solution-state scenario, the sites within each class were described with an independent-site model. Transitioning from a solution state with lower Ca²⁺ affinity to a membrane-associated, higher Ca²⁺ affinity state, results in cooperative binding. We discuss how weak membrane association of annexin a5 prior to Ca²⁺ influx is the basis for the cooperative response of annexin a5 toward Ca²⁺, and the role of membrane organization in this response.

Indexed as

Models, BiologicalAnnexin A5CalciumCell MembraneMembrane LipidsProtein BindingAnnexin A5CalciumMembrane Lipids

Identifiers

PMID23746516
PMCPMC3672869
OpenAlexW1965253898

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.