Evidence map›Paper›PMID 23746446›Full record

ArticleCell reports2013

The making of a slicer: activation of human Argonaute-1.

Christopher R Faehnle, Elad Elkayam, Astrid D Haase, Gregory J Hannon, Leemor Joshua-Tor

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 138 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. The structural basis for RNA slicing by human Argonaute2.bioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Structural basis for RNA slicing by a plant Argonaute.Nature structural & molecular biology · 2023
    Article
  12. Review
  13. Analysis of C. elegans Germline Small RNA Pathways.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Christopher R FaehnleW.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
Elad Elkayam
Astrid D Haase
Gregory J Hannon
Leemor Joshua-Tor
Howard Hughes Medical Institute · USCold Spring Harbor Laboratory · US

Funding

Roles of small RNAs in guarding germ cell genomesR37GM062534 · NIGMS · NEW YORK GENOME CENTER · PI HANNON, GREGORY J · 2013 to 2017
$2.0M
Howard Hughes Medical InstituteNIGMS NIH HHS R37 GM062534
6 · The paper itself

Abstract

Argonautes are the central protein component in small RNA silencing pathways. Of the four human Argonautes (hAgo1-hAgo4) only hAgo2 is an active slicer. We determined the structure of hAgo1 bound to endogenous copurified RNAs to 1.75 Å resolution and hAgo1 loaded with let-7 microRNA to 2.1 Å. Both structures are strikingly similar to the structures of hAgo2. A conserved catalytic tetrad within the PIWI domain of hAgo2 is required for its slicing activity. Completion of the tetrad, combined with a mutation on a loop adjacent to the active site of hAgo1, results in slicer activity that is substantially enhanced by swapping in the N domain of hAgo2. hAgo3, with an intact tetrad, becomes an active slicer by swapping the N domain of hAgo2 without additional mutations. Intriguingly, the elements that make Argonaute an active slicer involve a sophisticated interplay between the active site and more distant regions of the enzyme.

Indexed as

Amino Acid SequenceAnimalsArgonaute ProteinsEukaryotic Initiation FactorsHumansMicroRNAsModels, MolecularMolecular Sequence DataPoint MutationProtein Structure, TertiaryRNA, Small InterferingSf9 CellsAGO1 protein, humanAGO2 protein, humanArgonaute ProteinsEukaryotic Initiation FactorsMicroRNAsmirnlet7 microRNA, humanRNA, Small Interfering

Identifiers

PMID23746446
PMCPMC3769929
OpenAlexW2110989021

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.