Evidence map›Paper›PMID 23744582›Full record

ArticleBlood2013

Ribosomal and hematopoietic defects in induced pluripotent stem cells derived from Diamond Blackfan anemia patients.

Loïc Garçon, Jingping Ge, Shwetha H Manjunath, Jason A Mills, Marisa Apicella, Shefali Parikh, Lisa M Sullivan, Gregory M Podsakoff, Paul Gadue, Deborah L French and 3 more

Abstract read
In one paragraph

Article in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
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  12. Review
  13. Translational control of stem cell function.Nature reviews. Molecular cell biology · 2021
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Loïc GarçonDivision of Hematology, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Jingping Ge
Shwetha H Manjunath
Jason A Mills
Marisa Apicella
Shefali Parikh
Lisa M Sullivan
Gregory M Podsakoff
Paul Gadue
Deborah L French
Philip J Mason
Monica Bessler
Mitchell J Weiss
Children's Hospital of Philadelphia · USEmory University Hospital · USSorbonne Université · FR

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
INSTITUTIONAL CLINICAL AND TRANSLATIONAL SCIENCE AWARDUL1RR024134 · NCRR · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2006 to 2011
$70.4M
Institutional Clinical and Translational Science AwardUL1TR000003 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2012 to 2015
$38.9M
Research BaseP30DK090969 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI CARROLL, MARTIN · 2010 to 2015
$5.7M
MOLECULAR STUDIES OF BONE MARROW FAILURER01CA105312 · NCI · WASHINGTON UNIVERSITY · PI BESSLER, MONICA · 2004 to 2014
$4.9M
THE PATHOGENESIS OF DYSKERATOSIS CONGENITAR01CA106995 · NCI · WASHINGTON UNIVERSITY · PI MASON, PHILIP J · 2005 to 2014
$3.0M
Hematopoiesis from Normal and Patient-Derived Induced Pluripotent Stem CellsRC2HL101606 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI WEISS, MITCHELL J · 2009 to 2010
$2.0M
NCATS NIH HHS UL1 TR000003NCATS NIH HHS UL1TR000003NCI NIH HHS 2R01 CA105312NCI NIH HHS 2R01CA106995NCI NIH HHS P30 CA016520NCI NIH HHS R01 CA105312NCI NIH HHS R01 CA106995NCRR NIH HHS UL1 RR024134NCRR NIH HHS UL1RR024134NHLBI NIH HHS RC2 HL101606NIDDK NIH HHS P30 DK090969NIDDK NIH HHS P30DK090969
6 · The paper itself

Abstract

Diamond Blackfan anemia (DBA) is a congenital disorder with erythroid (Ery) hypoplasia and tissue morphogenic abnormalities. Most DBA cases are caused by heterozygous null mutations in genes encoding ribosomal proteins. Understanding how haploinsufficiency of these ubiquitous proteins causes DBA is hampered by limited availability of tissues from affected patients. We generated induced pluripotent stem cells (iPSCs) from fibroblasts of DBA patients carrying mutations in RPS19 and RPL5. Compared with controls, DBA fibroblasts formed iPSCs inefficiently, although we obtained 1 stable clone from each fibroblast line. RPS19-mutated iPSCs exhibited defects in 40S (small) ribosomal subunit assembly and production of 18S ribosomal RNA (rRNA). Upon induced differentiation, the mutant clone exhibited globally impaired hematopoiesis, with the Ery lineage affected most profoundly. RPL5-mutated iPSCs exhibited defective 60S (large) ribosomal subunit assembly, accumulation of 12S pre-rRNA, and impaired erythropoiesis. In both mutant iPSC lines, genetic correction of ribosomal protein deficiency via complementary DNA transfer into the "safe harbor" AAVS1 locus alleviated abnormalities in ribosome biogenesis and hematopoiesis. Our studies show that pathological features of DBA are recapitulated by iPSCs, provide a renewable source of cells to model various tissue defects, and demonstrate proof of principle for genetic correction strategies in patient stem cells.

Indexed as

Anemia, Diamond-BlackfanCell Culture TechniquesCell DifferentiationCell LineageFibroblastsGenetic VectorsHumansInduced Pluripotent Stem CellsLentivirusMutationRibosomal ProteinsRibosomesRibosome Subunits, Large, EukaryoticRibosome Subunits, Small, EukaryoticRNA, Ribosomal, 18Sribosomal protein L5, humanRibosomal Proteinsribosomal protein S19RNA, Ribosomal, 18S

Identifiers

PMID23744582
PMCPMC3739037
OpenAlexW2075461190

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.