Evidence map›Paper›PMID 23743299›Full record

ArticleExperimental hematology2013

KIT GNNK splice variants: expression in systemic mastocytosis and influence on the activating potential of the D816V mutation in mast cells.

Eunice Ching Chan, Yun Bai, Geethani Bandara, Olga Simakova, Erica Brittain, Linda Scott, Kimberly D Dyer, Amy D Klion, Irina Maric, Alasdair M Gilfillan and 2 more

Abstract read
In one paragraph

Article in Experimental hematology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Detection ofInternational journal of molecular sciences · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Mastocytosis: from a Molecular Point of View.Clinical reviews in allergy & immunology · 2018
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Eunice Ching ChanMast Cell Biology Section, Laboratory of Allergic Diseases, Bethesda, MD, USA.
Yun Bai
Geethani Bandara
Olga Simakova
Erica Brittain
Linda Scott
Kimberly D Dyer
Amy D Klion
Irina Maric
Alasdair M Gilfillan
Dean D Metcalfe
Todd M Wilson
National Institute of Allergy and Infectious Diseases · USNational Institutes of Health Clinical Center · US

Funding

Eosinophils and Eosinophil Activation in the Pathogenesis of Human DiseaseZIAAI001130 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KLION, AMY · 2010 to 2025
$22.5M
The Pathogenesis, Diagnosis, And Treatment Of Systemic Mast Cell DisordersZIAAI000249 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KOMAROW, HIRSH D · 2009 to 2025
$16.5M
Laboratory Assessment of Patients with Systemic MastocytosisZIACL080005 · CLC · CLINICAL CENTER · PI MARIC, IRINA · 2009 to 2025
$0k
Intramural NIH HHS ZIA AI000249
6 · The paper itself

Abstract

Stem cell factor-dependent KIT activation is an essential process for mast cell homeostasis. The two major splice variants of KIT differ by the presence or absence of four amino acids (GNNK) at the juxta-membrane region of the extracellular domain. We hypothesized that the expression pattern of these variants differs in systemic mastocytosis and that transcripts containing the KIT D816V mutation segregate preferentially to one GNNK variant. A quantitative real-time PCR assay to assess GNNK(-) and GNNK(+) transcripts from bone marrow mononuclear cells was developed. The GNNK(-)/GNNK(+) copy number ratio showed a trend toward a positive correlation with the percentage of neoplastic mast cell involvement, and KIT D816V containing transcripts displayed a significantly elevated GNNK(-)/GNNK(+) copy number ratio. Relative expression of only the GNNK(-) variant correlated with increasing percentage of neoplastic mast cell involvement. A mast cell transfection system revealed that the GNNK(-) isoform of wild type KIT was associated with increased granule formation, histamine content, and growth. When accompanying the KIT D816V mutation, the GNNK(-) isoform enhanced cytokine-free metabolism and moderately reduced sensitivity to the tyrosine kinase inhibitor, PKC412. These data suggest that neoplastic mast cells favor a GNNK(-) variant predominance, which in turn enhances the activating potential of the KIT D816V mutation and thus could influence therapeutic sensitivity in systemic mastocytosis.

Indexed as

Gene Expression Regulation, NeoplasticMutationAdultAgedDrug Resistance, NeoplasmEnzyme ActivationEnzyme InhibitorsFemaleHumansMaleMast CellsMastocytosis, SystemicMiddle AgedProtein IsoformsProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-kitEnzyme InhibitorsmidostaurinProtein IsoformsProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-kitStaurosporine

Identifiers

PMID23743299
PMCPMC3816383
OpenAlexW2041484811

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.