Evidence map›Paper›PMID 23742691›Full record

ArticleBMC research notes2013

Use of expressed sequence tags as an alternative approach for the identification of Taenia solium metacestode excretion/secretion proteins.

Bjorn Victor, Pierre Dorny, Kirezi Kanobana, Katja Polman, Johan Lindh, André M Deelder, Magnus Palmblad, Sarah Gabriël

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Article in BMC research notes, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Bjorn VictorVeterinary Helminthology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium. bvictor@itg.be
Pierre Dorny
Kirezi Kanobana
Katja Polman
Johan Lindh
André M Deelder
Magnus Palmblad
Sarah Gabriël

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTaenia solium taeniasis/cysticercosis is a zoonotic helminth infection mainly found in rural regions of Africa, Asia and Latin America. In endemic areas, diagnosis of cysticercosis largely depends on serology, but these methods have their drawbacks and require improvement. This implies better knowledge of the proteins secreted and excreted by the parasite. In a previous study, we used a custom protein database containing protein sequences from related helminths to identify T. solium metacestode excretion/secretion proteins. An alternative or complementary approach would be to use expressed sequence tags combined with BLAST and protein mapping to supercontigs of Echinococcus granulosus, a closely related cestode. In this study, we evaluate this approach and compare the results to those obtained in the previous study.

findingsWe report 297 proteins organized in 106 protein groups based on homology. Additional classification was done using Gene Ontology information on biological process and molecular function. Of the 106 protein groups, 58 groups were newly identified, while 48 groups confirmed previous findings. Blast2GO analysis revealed that the majority of the proteins were involved in catalytic activities and binding.

conclusionsIn this study, we used translated expressed sequence tags combined with BLAST and mapping strategies to both confirm and complement previous research. Our findings are comparable to recent studies on other helminth genera like Echinococcus, Schistosoma and Clonorchis, indicating similarities between helminth excretion/secretion proteomes.

Indexed as

Expressed Sequence TagsAnimalsCestodaHelminth ProteinsTaenia soliumHelminth Proteins

Identifiers

PMID23742691
PMCPMC3686625

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