Evidence map›Paper›PMID 23740770›Full record

ArticleProtein science : a publication of the Protein Society2013

The role of tyrosine sulfation in the dimerization of the CXCR4:SDF-1 complex.

Chaya Rapp, Sara Snow, Talya Laufer, Christopher L McClendon

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chaya RappDepartment of Chemistry and Biochemistry, Stern College for Women, Yeshiva University, New York, New York, USA. rappc@yu.edu
Sara Snow
Talya Laufer
Christopher L McClendon
Yeshiva University · USUniversity of Montana · US

Funding

Computational Modeling of Post-translational Modifications in ProteinsR15GM098997 · NIGMS · YESHIVA UNIVERSITY · PI RAPP, CHAYA K · 2011 to 2011
$250k
NIGMS NIH HHS 1R15GM098997-01
6 · The paper itself

Abstract

Oligomerization of G protein-coupled receptors is a recognized mode of regulation of receptor activities, with alternate oligomeric states resulting in different signaling functions. The CXCR4 chemokine receptor is a G protein-coupled receptor that is post-translationally modified by tyrosine sulfation at three sites on its N-terminus (Y7, Y12, Y21), leading to enhanced affinity for its ligand, stromal cell derived factor (SDF-1, also called CXCL12). The complex has been implicated in cancer metastasis and is a therapeutic target in cancer treatment. Using molecular dynamics simulation of NMR-derived structures of the CXCR4 N-terminus in complex with SDF-1, and calculations of electrostatic binding energies for these complexes, we address the role of tyrosine sulfation in this complex. Our results show that sulfation stabilizes the dimeric state of the CXCR4:SDF-1 complex through hydrogen bonding across the dimer interface, conformational changes in residues at the dimer interface, and an enhancement in electrostatic binding energies associated with dimerization. These findings suggest a mechanism through which post-translational modifications such as tyrosine sulfation might regulate downstream function through modulation of the oligomeric state of the modified system.

Indexed as

Amino AcidsChemokine CXCL12Hydrogen BondingLigandsModels, MolecularMolecular Dynamics SimulationProtein BindingProtein ConformationProtein MultimerizationProtein Processing, Post-TranslationalReceptors, CXCR4TyrosineAmino AcidsChemokine CXCL12LigandsReceptors, CXCR4Tyrosinetyrosine O-sulfatechemokine receptordimerizationmolecular dynamicspost-translational modificationsulfotyrosine

Identifiers

PMID23740770
PMCPMC3832039
OpenAlexW1709639993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.