Evidence map›Paper›PMID 23738321›Full record

ArticleInternational journal of genomics2013

Comparative genomics of cryptosporidium.

Aurélien J Mazurie, João M Alves, Luiz S Ozaki, Shiguo Zhou, David C Schwartz, Gregory A Buck

Open access · goldAbstract read
In one paragraph

Article in International journal of genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Understanding theFrontiers in parasitology · 2024
    Review
  5. Article
  6. Review
  7. Article
  8. Food and waterborne parasitology · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Genomics of apicomplexan parasites.Critical reviews in biochemistry and molecular biology · 2017
    Review
  16. Article
  17. Identification of invasion proteins of Cryptosporidium parvum.World journal of microbiology & biotechnology · 2015
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Aurélien J MazurieDepartment of Microbiology, Montana State University, Bozeman, MT 59717, USA ; Department of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USA.
João M Alves
Luiz S Ozaki
Shiguo Zhou
David C Schwartz
Gregory A Buck
Virginia Commonwealth University · USUniversity of Wisconsin–Madison · US

Funding

Vaccine strategy for broad spectrum protection agains non-typhoidal salmonellU54AI057168 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI LEVINE, MYRON MAX · 2003 to 2013
$91.5M
CRYPTOSPORIDIUM PARVUM GENOME SEQUENCING PROJECTU01AI046418 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI BUCK, GREGORY ALLEN · 2000 to 2003
$2.6M
Functional genomics of metacyclogenesis in T.cruziR01AI050196 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI BUCK, GREGORY ALLEN · 2002 to 2006
$2.6M
Functional Genomics of Cryptosporidium parvumR01AI055347 · NIAID · TUFTS UNIVERSITY BOSTON · PI WIDMER, GIOVANNI · 2004 to 2007
$1.7M
Molecular Interactions of the SL RNA in T.cruziR01AI050425 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI BUCK, GREGORY ALLEN · 2001 to 2005
$1.6M
NIAID NIH HHS R01 AI050196NIAID NIH HHS R01 AI050425NIAID NIH HHS R01 AI055347NIAID NIH HHS U01 AI046418NIAID NIH HHS U54 AI057168
6 · The paper itself

Abstract

Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95-97% identity. The availability of the complete genome sequences of these organisms provides the potential to identify the genetic variations that are responsible for the phenotypic differences between the two parasites. We compared the genome organization and structure, gene composition, the metabolic and other pathways, and the local sequence identity between the genes of these two Cryptosporidium species. Our observations show that the phenotypic differences between C. hominis and C. parvum are not due to gross genome rearrangements, structural alterations, gene deletions or insertions, metabolic capabilities, or other obvious genomic alterations. Rather, the results indicate that these genomes exhibit a remarkable structural and compositional conservation and suggest that the phenotypic differences observed are due to subtle variations in the sequences of proteins that act at the interface between the parasite and its host.

Identifiers

PMID23738321
PMCPMC3659464
OpenAlexW2049602707

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.