Evidence map›Paper›PMID 23737523›Full record

ArticleThe Journal of biological chemistry2013

The chlorite dismutase (HemQ) from Staphylococcus aureus has a redox-sensitive heme and is associated with the small colony variant phenotype.

Jeffrey A Mayfield, Neal D Hammer, Richard C Kurker, Thomas K Chen, Sunil Ojha, Eric P Skaar, Jennifer L DuBois

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Metabolic reprogramming promotesMicrobiology (Reading, England) · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Making and breaking heme.Current opinion in structural biology · 2019
    Review
  12. Article
  13. Respiration and Small Colony Variants ofMicrobiology spectrum · 2019
    Review
  14. Article
  15. Article
  16. mBio · 2018
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Jeffrey A MayfieldDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, USA.
Neal D Hammer
Richard C Kurker
Thomas K Chen
Sunil Ojha
Eric P Skaar
Jennifer L DuBois
Montana State University · USUniversity of Notre Dame · USVanderbilt University · USSRI International · US

Funding

Pathobiology of heme inducible transporters in Gram positive pathogensR01AI073843 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SKAAR, ERIC P · 2009 to 2025
$5.9M
Mechanism and function of heme-iron utilization in staphylococcal pathogenesisR01AI069233 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SKAAR, ERIC P · 2006 to 2020
$5.6M
Understanding the diverse biochemistry of the chlorite dismutase family: from O2 to hemeR01GM090260 · NIGMS · UNIVERSITY OF NOTRE DAME · PI DUBOIS, JENNIFER L · 2009 to 2018
$2.7M
NIAID NIH HHS R01 AI069233NIAID NIH HHS R01AI069233NIAID NIH HHS R01 AI073843NIAID NIH HHS R01AI073843NIGMS NIH HHS R01 GM090260NIGMS NIH HHS R01GM090260
6 · The paper itself

Abstract

The chlorite dismutases (C-family proteins) are a widespread family of heme-binding proteins for which chemical and biological roles remain unclear. An association of the gene with heme biosynthesis in Gram-positive bacteria was previously demonstrated by experiments involving introduction of genes from two Gram-positive species into heme biosynthesis mutant strains of Escherichia coli, leading to the gene being renamed hemQ. To assess the gene product's biological role more directly, a Staphylococcus aureus strain with an inactivated hemQ gene was generated and shown to be a slow growing small colony variant under aerobic but not anaerobic conditions. The small colony variant phenotype is rescued by the addition of exogenous heme despite an otherwise wild type heme biosynthetic pathway. The ΔhemQ mutant accumulates coproporphyrin specifically under aerobic conditions. Although its sequence is highly similar to functional chlorite dismutases, the HemQ protein has no steady state reactivity with chlorite, very modest reactivity with H2O2 or peracetic acid, and no observable transient intermediates. HemQ's equilibrium affinity for heme is in the low micromolar range. Holo-HemQ reconstituted with heme exhibits heme lysis after <50 turnovers with peroxide and <10 turnovers with chlorite. The heme-free apoprotein aggregates or unfolds over time. IsdG-like proteins and antibiotic biosynthesis monooxygenases are close sequence and structural relatives of HemQ that use heme or porphyrin-like organic molecules as substrates. The genetic and biochemical data suggest a similar substrate role for heme or porphyrin, with possible sensor-regulator functions for the protein. HemQ heme could serve as the means by which S. aureus reversibly adopts an SCV phenotype in response to redox stress.

Indexed as

Bacterial ProteinsCoproporphyrinsEscherichia coliGene DeletionHemeOxidative StressOxidoreductasesPhenotypeStaphylococcus aureusBacterial Proteinschlorite dismutaseCoproporphyrinsHemeOxidoreductasesBacteriaChlorite DismutaseHemePeroxidaseRedox RegulationStaphylococcus aureusSuperoxide Ion

Identifiers

PMID23737523
PMCPMC5395028
OpenAlexW2042648353

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.