Evidence map›Paper›PMID 23735084›Full record

ArticleEmerging infectious diseases2013

Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee.

Mireia Coscolla, Astrid Lewin, Sonja Metzger, Kerstin Maetz-Rennsing, Sébastien Calvignac-Spencer, Andreas Nitsche, Pjotr Wojtek Dabrowski, Aleksandar Radonic, Stefan Niemann, Julian Parkhill and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 113 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Diversification of gene content in theMicrobiology spectrum · 2024
    Article
  10. Whole genome sequencing improves the discrimination betweenOne health (Amsterdam, Netherlands) · 2023
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Pathogens (Basel, Switzerland) · 2022
    Article
  18. Article
  19. Molecular detection ofNew microbes and new infections · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 4 countries.

Mireia CoscollaSwiss Tropical and Public Health Institute, Basel, Switzerland.
Astrid Lewin
Sonja Metzger
Kerstin Maetz-Rennsing
Sébastien Calvignac-Spencer
Andreas Nitsche
Pjotr Wojtek Dabrowski
Aleksandar Radonic
Stefan Niemann
Julian Parkhill
Emmanuel Couacy-Hymann
Julia Feldman
Iñaki Comas
Christophe Boesch
Sebastien Gagneux
Fabian H Leendertz
Max Planck Institute for Evolutionary Anthropology · DEUniversity of Basel · CHGerman Primate Center · DELaboratoire National d'Appui au Développement Agricole · CIRobert Koch Institute · DEWellcome Sanger Institute · GBMax Planck Society · DESwiss Tropical and Public Health Institute · CH

Funding

Mycobacterium tuberculosis antigen diversityR01AI090928 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ERNST, JOEL D., GAGNEUX, SEBASTIEN · 2010 to 2014
$3.2M
NIAID NIH HHS AI090928NIAID NIH HHS R01 AI090928PHS HHS HHSN266200700022CWellcome Trust
6 · The paper itself

Abstract

Tuberculosis (TB) is caused by gram-positive bacteria known as the Mycobacterium tuberculosis complex (MTBC). MTBC include several human-associated lineages and several variants adapted to domestic and, more rarely, wild animal species. We report an M. tuberculosis strain isolated from a wild chimpanzee in Côte d'Ivoire that was shown by comparative genomic and phylogenomic analyses to belong to a new lineage of MTBC, closer to the human-associated lineage 6 (also known as M. africanum West Africa 2) than to the other classical animal-associated MTBC strains. These results show that the general view of the genetic diversity of MTBC is limited and support the possibility that other MTBC variants exist, particularly in wild mammals in Africa. Exploring this diversity is crucial to the understanding of the biology and evolutionary history of this widespread infectious disease.

Indexed as

AnimalsApe DiseasesFemaleGenome, BacterialMycobacterium tuberculosisPan troglodytesPhylogenyPolymorphism, Single NucleotideSequence Analysis, DNATuberculosisAfricabacteriainfectionlineagemammalsMTBCM. tuberculosisMycobacterium tuberculosisnonhuman primateTBtuberculosistuberculosis and other mycobacteriawild chimpanzeezoonoses

Identifiers

PMID23735084
PMCPMC3713819
OpenAlexW2130188722

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.