Evidence map›Paper›PMID 23734608›Full record

ArticleBMC veterinary research2013

Multiplex PCR followed by restriction length polymorphism analysis for the subtyping of bovine herpesvirus 5 isolates.

Silvina Soledad Maidana, Cintia Débora Morano, Daniela Cianfrini, Fabrício Souza Campos, Paulo Michel Roehe, Bianca Siedler, Gabriel De Stefano, Axel Mauroy, Etienne Thiry, Sonia Alejandra Romera

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. A new molecular method for the rapid subtyping of bovine herpesvirus 1 field isolates.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2020
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Silvina Soledad MaidanaInstituto de Virología, Centro de Investigaciones en Ciencias Veterinarias y, Agronómicas (CICVyA), Instituto de tecnología Agropecuaria (INTA), N. Repetto, y Los Reseros S/N, CC25, (B1712WAA), Castelar, Buenos Aires, Argentina.
Cintia Débora Morano
Daniela Cianfrini
Fabrício Souza Campos
Paulo Michel Roehe
Bianca Siedler
Gabriel De Stefano
Axel Mauroy
Etienne Thiry
Sonia Alejandra Romera
Universidade Federal do Rio Grande do Sul · BRUniversity of Liège · BEConsejo Nacional de Investigaciones Científicas y Técnicas · ARUniversidad del Salvador · ARUniversidade Federal de Pelotas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSeveral types and subtypes of bovine herpesviruses 1 and 5 (BoHV-1 and BoHV-5) have been associated to different clinical conditions of cattle, making type/subtype differentiation essential to understand the pathogenesis and epidemiology of BoHV infections. BoHV-5 subtyping is currently carried out by BstEII restriction enzyme analysis (REA) of the complete virus genome. This method allowed the description of three subtypes, one of which is the most widespread while the remaining two have so far only been found in South America. The present work describes a multiplex PCR followed by REA for BoHV-5 subtyping.

resultsThe method consists in the simultaneous amplification of glycoprotein B and UL54 gene fragments of 534 and 669 base pairs (bp), respectively, BstEII digestion of amplicons, separation of products in 1% agarose gels, and analysis of fragment length polymorphims. The multiplex PCR detected up to 227 BoHV-5 genome copies and 9.2 × 105 BoHV-5 genome copies when DNA was extracted from purified virus or infected tissue homogenates, respectively. The applicability of multiplex PCR-REA was demonstrated on 3 BoHV-5 reference strains. In addition, subtyping of two new isolates and seventeen previously reported ones (17 BHV-5a and 2 BHV-5b) by this method gave coincident results with those obtained with the classic BstEII REA assay.

conclusionsMultiplex PCR-REA provides a new tool for the fast and simple diagnosis and subtyping of BoHV-5.

Indexed as

AnimalsCattleCattle DiseasesEncephalitis, ViralHerpesviridae InfectionsHerpesvirus 5, BovineMaleMeningoencephalitisMultiplex Polymerase Chain ReactionRandom Amplified Polymorphic DNA TechniqueSensitivity and Specificity

Identifiers

PMID23734608
PMCPMC3679755
OpenAlexW2059083844

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.