Evidence map›Paper›PMID 23728627›Full record

ArticleMicrobiology (Reading, England)2013

Three functional β-carbonic anhydrases in Pseudomonas aeruginosa PAO1: role in survival in ambient air.

Shalaka R Lotlikar, Shane Hnatusko, Nicholas E Dickenson, Shyamal P Choudhari, Wendy L Picking, Marianna A Patrauchan

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

  1. Lead contamination fixation through COScientific reports · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Carbonic Anhydrases: A Superfamily of Ubiquitous Enzymes.International journal of molecular sciences · 2023
    Article
  7. Review
  8. Review
  9. Microbiology (Reading, England) · 2021
    Article
  10. Effect of COFrontiers in microbiology · 2019
    Article
  11. The COVeterinary research · 2018
    Article
  12. Article
  13. Article
  14. Cryoannealing-induced space-group transition of crystals of the carbonic anhydrase psCA3.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
  15. Article
  16. Article
  17. Article
  18. Carbon dioxide-sensing in organisms and its implications for human disease.Cellular and molecular life sciences : CMLS · 2014
    Review
  19. Preliminary X-ray crystallographic analysis of β-carbonic anhydrase psCA3 from Pseudomonas aeruginosa.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shalaka R LotlikarDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Shane HnatuskoDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Nicholas E DickensonDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Shyamal P ChoudhariDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Wendy L PickingDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Marianna A PatrauchanDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK 74078, USA.
Oklahoma State University · US

Funding

Translational Research Center to Expedite Novel Therapies in Cystic FibrosisP30DK089507 · NIDDK · SEATTLE CHILDREN'S HOSPITAL · PI Christopher Hooper Goss, Lucas R Hoffman · 2010 to 2026
$21.4M
NIDDK NIH HHS P30 DK089507
6 · The paper itself

Abstract

Bacterial β-class carbonic anhydrases (CAs) are zinc metalloenzymes catalysing reversible hydration of CO2. They maintain the intracellular balance of CO2/bicarbonate required for biosynthetic reactions and represent a new group of antimicrobial drug targets. Genome sequence analysis of Pseudomonas aeruginosa PAO1, an opportunistic human pathogen causing life threatening infections, identified three genes, PAO102, PA2053 and PA4676, encoding putative β-CAs that share 28-45 % amino acid sequence identity and belong to clades A and B. The genes are conserved among all sequenced pseudomonads. The CAs were cloned, heterologously expressed and purified. Metal and enzymic analyses confirmed that the proteins contain Zn(2+) and catalyse hydration of CO2 to bicarbonate. PAO102 (psCA1) was 19-26-fold more active, and together with PA2053 (psCA2) showed CA activity at both pH 7.5 and 8.3, whereas PA4676 (psCA3) was active only at pH 8.3. Circular dichroism spectroscopy suggested that psCA2 and psCA3 undergo pH-dependent structural changes. Taken together, the data suggest that psCA1 may belong to type I and psCA3 to type II β-CAs. Immunoblot analysis showed that all three CAs are expressed in PAO1 cells when grown in ambient air and at 5 % CO2; psCA1 appeared more abundant under both conditions. Growth studies of transposon mutants showed that the disruption of psCA1 impaired PAO1 growth in ambient air and caused a minor defect at high CO2. Thus, psCA1 contributes to the adaptation of P. aeruginosa to low CO2 conditions and will be further studied for its role in virulence and as a potential antimicrobial drug target in this organism.

Indexed as

AirMicrobial ViabilityBicarbonatesBlotting, WesternCarbon DioxideCarbonic AnhydrasesCircular DichroismCloning, MolecularCluster AnalysisCoenzymesComputational BiologyConserved SequenceDNA Transposable ElementsEnzyme StabilityGene ExpressionGene Expression ProfilingBicarbonatesCarbon DioxideCarbonic AnhydrasesCoenzymesDNA Transposable ElementsRecombinant ProteinsZinc

Identifiers

PMID23728627
PMCPMC4089032
OpenAlexW2141760010

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.