Evidence map›Paper›PMID 23728494›Full record

ArticleNature chemical biology2013

Side pockets provide the basis for a new mechanism of Kv channel-specific inhibition.

Stefanie Marzian, Phillip J Stansfeld, Markus Rapedius, Susanne Rinné, Ehsan Nematian-Ardestani, Jennifer L Abbruzzese, Klaus Steinmeyer, Mark S P Sansom, Michael C Sanguinetti, Thomas Baukrowitz and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Discovery of KMedicinal research reviews · 2021
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Molecular determinants of beta-adrenergic signaling to voltage-gated KMicrocirculation (New York, N.Y. : 1994) · 2018
    Review
  19. Article
  20. Angiotensin II reduces the surface abundance of KThe Journal of physiology · 2017
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Stefanie MarzianInstitute for Physiology and Pathophysiology, University of Marburg, Marburg, Germany.
Phillip J Stansfeld
Markus Rapedius
Susanne Rinné
Ehsan Nematian-Ardestani
Jennifer L Abbruzzese
Klaus Steinmeyer
Mark S P Sansom
Michael C Sanguinetti
Thomas Baukrowitz
Niels Decher
Kiel University · DEPhilipps University of Marburg · DEUniversity of Oxford · GBUniversity of Utah · USSanofi (Germany) · DE

Funding

Molecular mechanisms of hERG1 channel activatorsR01HL055236 · NHLBI · UNIVERSITY OF UTAH · PI SANGUINETTI, MICHAEL CRAIG · 1996 to 2015
$5.3M
Biotechnology and Biological Sciences Research Council B19456Biotechnology and Biological Sciences Research Council BB/H000267/1Biotechnology and Biological Sciences Research Council BB/I019855/1Biotechnology and Biological Sciences Research Council BBS/B/16011Biotechnology and Biological Sciences Research Council BEP17032NHLBI NIH HHS HL055236NHLBI NIH HHS R01 HL055236Wellcome Trust
6 · The paper itself

Abstract

Most known small-molecule inhibitors of voltage-gated ion channels have poor subtype specificity because they interact with a highly conserved binding site in the central cavity. Using alanine-scanning mutagenesis, electrophysiological recordings and molecular modeling, we have identified a new drug-binding site in Kv1.x channels. We report that Psora-4 can discriminate between related Kv channel subtypes because, in addition to binding the central pore cavity, it binds a second, less conserved site located in side pockets formed by the backsides of S5 and S6, the S4-S5 linker, part of the voltage sensor and the pore helix. Simultaneous drug occupation of both binding sites results in an extremely stable nonconducting state that confers high affinity, cooperativity, use-dependence and selectivity to Psora-4 inhibition of Kv1.x channels. This new mechanism of inhibition represents a molecular basis for the development of a new class of allosteric and selective voltage-gated channel inhibitors.

Indexed as

FicusinKv1.5 Potassium ChannelModels, MolecularMolecular StructureStructure-Activity RelationshipSubstrate Specificity5-(4-phenylbutoxy)psoralenFicusinKv1.5 Potassium Channel

Identifiers

PMID23728494
PMCPMC4539245
OpenAlexW2007755341

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.