Evidence map›Paper›PMID 23727862›Full record

ArticleNature genetics2013

Genome-wide association study identifies two susceptibility loci for osteosarcoma.

Sharon A Savage, Lisa Mirabello, Zhaoming Wang, Julie M Gastier-Foster, Richard Gorlick, Chand Khanna, Adrienne M Flanagan, Roberto Tirabosco, Irene L Andrulis, Jay S Wunder and 40 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03670927 (Etiosarc), which is not on this map. Cited by 128 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed, 3 pooled it
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03670927 completednot on this mapstarted 2019, after this paper: background citation

Etiosarc: Study of the Environmental Aetiology (Environment, Occupations and Lifestyle) of Sarcomas (Soft Tissue, Visceral and Bone) From a Multicenter French Population-based Case-control Study Among Adults.

TypeobservationalSponsorInstitut National de la Santé Et de la Recherche Médicale, FranceRan2019 to 2024Enrolled2,237ConditionsSarcoma, Environmental Exposure, Occupational Exposure, Life StyleArmsEnvironmental, occupational and lifestyle-related exposures
3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 3 syntheses or guidelines pooled it, 202 citations in OpenAlex.

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68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

50 authors at 16 institutions in 8 countries.

Sharon A SavageDivision of Cancer Epidemiology and Genetics, National Cancer Institute, US National Institutes of Health, Bethesda, MD, USA. savagesh@mail.nih.gov
Lisa Mirabello
Zhaoming Wang
Julie M Gastier-Foster
Richard Gorlick
Chand Khanna
Adrienne M Flanagan
Roberto Tirabosco
Irene L Andrulis
Jay S Wunder
Nalan Gokgoz
Ana Patiño-Garcia
Luis Sierrasesúmaga
Fernando Lecanda
Nilgün Kurucu
Inci Ergurhan Ilhan
Neriman Sari
Massimo Serra
Claudia Hattinger
Piero Picci
Logan G Spector
Donald A Barkauskas
Neyssa Marina
Silvia Regina Caminada de Toledo
Antonio S Petrilli
Maria Fernanda Amary
Dina Halai
David M Thomas
Chester Douglass
Paul S Meltzer
Kevin Jacobs
Charles C Chung
Sonja I Berndt
Mark P Purdue
Neil E Caporaso
Margaret Tucker
Nathaniel Rothman
Maria Teresa Landi
Debra T Silverman
Peter Kraft
David J Hunter
Nuria Malats
Manolis Kogevinas
Sholom Wacholder
Rebecca Troisi
Lee Helman
Joseph F Fraumeni
Meredith Yeager
Robert N Hoover
Stephen J Chanock
National Institutes of Health · USNational Cancer Institute · USNational Health Service · GBClinica Universidad de Navarra · ESHarvard University · USIstituto Ortopedico Rizzoli · ITMount Sinai Hospital · CASupport group for adolescents and children with cancer · BRAlbert Einstein College of Medicine · USCenter for Research in Environmental Epidemiology · ESLucile Packard Children's Hospital · USNationwide Children's Hospital · USSpanish National Cancer Research Centre · ESThe University of Melbourne · AUUniversity of Minnesota · USUniversity of Southern California · US

Funding

COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Characterization of the Osteosarcoma GenomeZIABC011328 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MELTZER, PAUL S. · 2010 to 2025
$28.0M
Genetic Modifiers of Cancer RiskZIACP010142 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI MIRABELLO, LISA · 2009 to 2025
$17.1M
Support for Human Specimen Banking in NCI-Supported Cancer Clinical TrialsU24CA114766 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RAMIREZ MILAN, NILSA DEL CARMEN · 2005 to 2014
$14.5M
Intramural NIH HHS ZIA CP010142NCI NIH HHS U10 CA098543NCI NIH HHS U24 CA114766
6 · The paper itself

Abstract

Osteosarcoma is the most common primary bone malignancy of adolescents and young adults. To better understand the genetic etiology of osteosarcoma, we performed a multistage genome-wide association study consisting of 941 individuals with osteosarcoma (cases) and 3,291 cancer-free adult controls of European ancestry. Two loci achieved genome-wide significance: a locus in the GRM4 gene at 6p21.3 (encoding glutamate receptor metabotropic 4; rs1906953; P = 8.1 × 10⁻⁹) and a locus in the gene desert at 2p25.2 (rs7591996 and rs10208273; P = 1.0 × 10⁻⁸ and 2.9 × 10⁻⁷, respectively). These two loci warrant further exploration to uncover the biological mechanisms underlying susceptibility to osteosarcoma.

Indexed as

Genetic LociGenetic Predisposition to DiseaseGenome-Wide Association StudyAdolescentAdultBone NeoplasmsCase-Control StudiesFemaleHumansLinkage DisequilibriumMaleOsteosarcomaPolymorphism, Single NucleotideWhite PeopleYoung Adult

Identifiers

PMID23727862
PMCPMC3910497
OpenAlexW2151554216

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.