Evidence map›Paper›PMID 23727239›Full record

ArticleCell reports2013

Transcriptional differences between normal and glioma-derived glial progenitor cells identify a core set of dysregulated genes.

Romane M Auvergne, Fraser J Sim, Su Wang, Devin Chandler-Militello, Jaclyn Burch, Yazan Al Fanek, Danielle Davis, Abdellatif Benraiss, Kevin Walter, Pragathi Achanta and 5 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Cell reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Mesenchymal Properties of Glioma Cell Lines.Bulletin of experimental biology and medicine · 2024
    Article
  7. Article
  8. ID1Cell death & disease · 2024
    Article
  9. Article
  10. In Vitro Phosphatase Assays for the Eya2 Tyrosine Phosphatase.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  11. Deciphering the Action of Neuraminidase in Glioblastoma Models.International journal of molecular sciences · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. A2B5 Expression in Central Nervous System and Gliomas.International journal of molecular sciences · 2022
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Romane M AuvergneCenter for Translational Neuromedicine, University of Rochester Medical Center, Rochester, NY 14642, USA. romane_auvergne@urmc.rochester.edu
Fraser J Sim
Su Wang
Devin Chandler-Militello
Jaclyn Burch
Yazan Al Fanek
Danielle Davis
Abdellatif Benraiss
Kevin Walter
Pragathi Achanta
Mahlon Johnson
Alfredo Quinones-Hinojosa
Sridaran Natesan
Heide L Ford
Steven A Goldman
University of Rochester Medical Center · USJohns Hopkins University · USUniversity of Colorado Denver · US

Funding

Role of Six1 in EMT and Tumor ProgressionR01CA095277 · NCI · UNIVERSITY OF COLORADO DENVER · PI FORD, HEIDE L. · 2002 to 2017
$4.3M
Regulation of adult human oligodendrocyte progenitorsR01NS039559 · NINDS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI GOLDMAN, STEVEN ALAN · 2000 to 2008
$3.0M
Molecular Regulation of Human Glial Progenitor Cell-Based RemyelinationR01NS075345 · NINDS · UNIVERSITY OF ROCHESTER · PI GOLDMAN, STEVEN ALAN · 2011 to 2015
$1.7M
Migration of Human Neural Stem Cells In Vitro and In VivoK08NS055851 · NINDS · JOHNS HOPKINS UNIVERSITY · PI QUINONES-HINOJOSA, ALFREDO · 2006 to 2010
$880k
NCI NIH HHS R01 CA095277NINDS NIH HHS K08 NS055851NINDS NIH HHS K08NS055851NINDS NIH HHS R01 NS039559NINDS NIH HHS R01 NS075345NINDS NIH HHS R01NS39559NINDS NIH HHS R01NS75345
6 · The paper itself

Abstract

Glial progenitor cells (GPCs) are a potential source of malignant gliomas. We used A2B5-based sorting to extract tumorigenic GPCs from human gliomas spanning World Health Organization grades II-IV. Messenger RNA profiling identified a cohort of genes that distinguished A2B5+ glioma tumor progenitor cells (TPCs) from A2B5+ GPCs isolated from normal white matter. A core set of genes and pathways was substantially dysregulated in A2B5+ TPCs, which included the transcription factor SIX1 and its principal cofactors, EYA1 and DACH2. Small hairpin RNAi silencing of SIX1 inhibited the expansion of glioma TPCs in vitro and in vivo, suggesting a critical and unrecognized role of the SIX1-EYA1-DACH2 system in glioma genesis or progression. By comparing the expression patterns of glioma TPCs with those of normal GPCs, we have identified a discrete set of pathways by which glial tumorigenesis may be better understood and more specifically targeted.

Indexed as

AdultBrain NeoplasmsCell DifferentiationCell Line, TumorGene Expression Regulation, NeoplasticGliomaHumansMiddle AgedNeoplastic Stem CellsNeurogliaTranscriptional Activation

Identifiers

PMID23727239
PMCPMC5293199
OpenAlexW1978842326

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.