Evidence map›Paper›PMID 23726974›Full record

ArticleDevelopmental cell2013

The yeast Alix homolog Bro1 functions as a ubiquitin receptor for protein sorting into multivesicular endosomes.

Natasha Pashkova, Lokesh Gakhar, Stanley C Winistorfer, Anna B Sunshine, Matthew Rich, Maitreya J Dunham, Liping Yu, Robert C Piper

Abstract read
In one paragraph

Article in Developmental cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed.

  1. Article
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  7. Vps60 initiates alternative ESCRT-III filaments.The Journal of cell biology · 2023
    Article
  8. Article
  9. Article
  10. Bro1 family proteins harmonize cargo sorting with vesicle formation.BioEssays : news and reviews in molecular, cellular and developmental biology · 2022
    Article
  11. Article
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  14. Article
  15. Article
  16. Article
  17. Review
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  19. Review
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Natasha PashkovaDepartment of Molecular Physiology and Biophysics, University of Iowa, Iowa City, IA 52242, USA.
Lokesh Gakhar
Stanley C Winistorfer
Anna B Sunshine
Matthew Rich
Maitreya J Dunham
Liping Yu
Robert C Piper

Funding

University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
GENETIC APPROACHES TO AGING RESEARCHT32AG000057 · NIA · UNIVERSITY OF WASHINGTON · PI RABINOVITCH, PETER S · 1985 to 2019
$14.2M
Ubiquitin-Dependent Sorting in Endosomes and the TGNR01GM058202 · NIGMS · UNIVERSITY OF IOWA · PI PIPER, ROBERT C · 1998 to 2025
$8.9M
Dissecting the genetic determinants of aneuploidy's effect on cellular proliferatF30CA165440 · NCI · UNIVERSITY OF WASHINGTON · PI SUNSHINE, ANNA BROSIUS · 2012 to 2013
$79k
NCI NIH HHS F30 CA165440NIA NIH HHS T32 AG000057NIGMS NIH HHS GM58202NIGMS NIH HHS NIH P41 GM103533NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM058202NIGMS NIH HHS T32 GM007266
6 · The paper itself

Abstract

Sorting of ubiquitinated membrane proteins into lumenal vesicles of multivesicular bodies is mediated by the Endosomal Sorting Complex Required for Transport (ESCRT) apparatus and accessory proteins such as Bro1, which recruits the deubiquitinating enzyme Doa4 to remove ubiquitin from cargo. Here we propose that Bro1 works as a receptor for the selective sorting of ubiquitinated cargoes. We found synthetic genetic interactions between BRO1 and ESCRT-0, suggesting that Bro1 functions similarly to ESCRT-0. Multiple structural approaches demonstrated that Bro1 binds ubiquitin via the N-terminal trihelical arm of its middle V domain. Mutants of Bro1 that lack the ability to bind Ub were dramatically impaired in their ability to sort Ub-cargo membrane proteins, but only when combined with hypomorphic alleles of ESCRT-0. These data suggest that Bro1 and other Bro1 family members function in parallel with ESCRT-0 to recognize and sort Ub-cargoes.

Indexed as

Calcium-Binding ProteinsCarrier ProteinsCell Cycle ProteinsClathrinCrystallography, X-RayEndosomal Sorting Complexes Required for TransportEndosomesHumansModels, MolecularMutagenesisMutationProtein ConformationProtein Interaction Domains and MotifsProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsBro1 protein, S cerevisiaeCalcium-Binding ProteinsCarrier ProteinsCell Cycle ProteinsClathrinEndosomal Sorting Complexes Required for TransportPDCD6IP protein, humanSaccharomyces cerevisiae ProteinsUbiquitin

Identifiers

PMID23726974
PMCPMC3755756

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.