Evidence map›Paper›PMID 23726366›Full record

ArticleAmerican journal of human genetics2013

Genome-wide characterization of shared and distinct genetic components that influence blood lipid levels in ethnically diverse human populations.

Marc A Coram, Qing Duan, Thomas J Hoffmann, Timothy Thornton, Joshua W Knowles, Nicholas A Johnson, Heather M Ochs-Balcom, Timothy A Donlon, Lisa W Martin, Charles B Eaton and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 8 pooled it
10.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 8 syntheses or guidelines pooled it, 127 citations in OpenAlex.

  1. Pooled it
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  13. Admixture mapping identifies complex trait associations with local ancestry in themedRxiv : the preprint server for health sciences · 2025
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Association Between rs2278426 Polymorphism of theDiabetes, metabolic syndrome and obesity : targets and therapy · 2024
    Article
  19. Strategies for the Genomic Analysis of Admixed Populations.Annual review of biomedical data science · 2023
    Review
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 11 institutions in 1 country.

Marc A CoramDepartment of Health Research and Policy, Stanford University School of Medicine, Stanford, CA 94305, USA.
Qing Duan
Thomas J Hoffmann
Timothy Thornton
Joshua W Knowles
Nicholas A Johnson
Heather M Ochs-Balcom
Timothy A Donlon
Lisa W Martin
Charles B Eaton
Jennifer G Robinson
Neil J Risch
Xiaofeng Zhu
Charles Kooperberg
Yun Li
Alex P Reiner
Hua Tang
Stanford University · USUniversity of California, San Francisco · USUniversity of North Carolina at Chapel Hill · USUniversity of Washington · USBrown University · USFred Hutch Cancer Center · USGeorge Washington University · USKuakini Medical Center · USUniversity at Buffalo, State University of New York · USUniversity of Iowa · USUniversity School · US

Funding

Statistical Methods for X-Chromosome Genetic DataP01GM099568 · NIGMS · UNIVERSITY OF WASHINGTON · PI THORNTON, TIMOTHY ALVIN · 2012 to 2016
$7.3M
Training in Molecular& Genetic Epidemiology of CancerR25CA112355 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WITTE, JOHN S. · 2005 to 2018
$6.5M
Genetic Architecture of Complex Traits in Admixed PopulationsR01GM073059 · NIGMS · STANFORD UNIVERSITY · PI TANG, HUA · 2005 to 2016
$2.4M
Imputation and Analysis of Rare Variants in Admixed PopulationsR01HG006703 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, YUN · 2012 to 2014
$931k
Estrogen Receptor 1 Gene, Adiposity, and Breast CancerK07CA136969 · NCI · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI OCHS-BALCOM, HEATHER M · 2009 to 2013
$810k
Statistical Methods for Cancer Genetic Association Studies with Hidden PopulationK01CA148958 · NCI · UNIVERSITY OF WASHINGTON · PI THORNTON, TIMOTHY ALVIN · 2010 to 2014
$682k
NCI NIH HHS K01 CA148958NCI NIH HHS K07 CA136969NCI NIH HHS R25 CA112355NHLBI NIH HHS HHSN268201100001INHLBI NIH HHS HHSN268201100002INHLBI NIH HHS HHSN268201100003INHLBI NIH HHS HHSN268201100046CNIA NIH HHS HHSN271201100004CNIGMS NIH HHS GM073059NIGMS NIH HHS P01 GM099568NIGMS NIH HHS R01 GM073059WHI NIH HHS HHSN268201100001CWHI NIH HHS HHSN268201100002CWHI NIH HHS HHSN268201100003C
6 · The paper itself

Abstract

Blood lipid concentrations are heritable risk factors associated with atherosclerosis and cardiovascular diseases. Lipid traits exhibit considerable variation among populations of distinct ancestral origin as well as between individuals within a population. We performed association analyses to identify genetic loci influencing lipid concentrations in African American and Hispanic American women in the Women's Health Initiative SNP Health Association Resource. We validated one African-specific high-density lipoprotein cholesterol locus at CD36 as well as 14 known lipid loci that have been previously implicated in studies of European populations. Moreover, we demonstrate striking similarities in genetic architecture (loci influencing the trait, direction and magnitude of genetic effects, and proportions of phenotypic variation explained) of lipid traits across populations. In particular, we found that a disproportionate fraction of lipid variation in African Americans and Hispanic Americans can be attributed to genomic loci exhibiting statistical evidence of association in Europeans, even though the precise genes and variants remain unknown. At the same time, we found substantial allelic heterogeneity within shared loci, characterized both by population-specific rare variants and variants shared among multiple populations that occur at disparate frequencies. The allelic heterogeneity emphasizes the importance of including diverse populations in future genetic association studies of complex traits such as lipids; furthermore, the overlap in lipid loci across populations of diverse ancestral origin argues that additional knowledge can be gleaned from multiple populations.

Indexed as

AgedBlack or African AmericanChromosomes, HumanFemaleGenetic LociGenome-Wide Association StudyHispanic or LatinoHumansLipidsMiddle AgedModels, GeneticPolymorphism, Single NucleotideLipids

Identifiers

PMID23726366
PMCPMC3675231
OpenAlexW2106069050

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.