Evidence map›Paper›PMID 23724324›Full record

ArticleISRN microbiology2012

Chromosomal Arrangement of AHL-Driven Quorum Sensing Circuits in Pseudomonas.

Zsolt Gelencsér, Borisz Galbáts, Juan F Gonzalez, K Sonal Choudhary, Sanjarbek Hudaiberdiev, Vittorio Venturi, Sándor Pongor

Open access · diamondAbstract read
In one paragraph

Article in ISRN microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. The atypical organization of theJournal of bacteriology · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Census of solo LuxR genes in prokaryotic genomes.Frontiers in cellular and infection microbiology · 2015
    Article
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Zsolt GelencsérFaculty of Information Technology, Pázmány Péter Catholic University, Práter u. 50/a, 1083 Budapest, Hungary.
Borisz Galbáts
Juan F Gonzalez
K Sonal Choudhary
Sanjarbek Hudaiberdiev
Vittorio Venturi
Sándor Pongor
International Centre for Genetic Engineering and Biotechnology · ITHUN-REN Szegedi Biológiai Kutatóközpont · HUPázmány Péter Catholic University · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas spp. are able to colonize a large variety of environments due to their wide adaptability which is also associated with an N-acyl homoserine lactone (AHL) gene regulation mechanism called quorum sensing (QS). In this article we present a systematic overview of the genomic arrangement patterns of quorum sensing genes found in Pseudomonas and compare the topologies with those found in other bacterial genomes. We find that the topological arrangement of QS genes is more variable than previously thought but there are a few unifying features that occur in many of the topological arrangements. We hypothesize that the negative regulators of QS that are often found between the canonical luxR/ and luxI-family genes may be crucial for stabilizing the output of QS circuits.

Identifiers

PMID23724324
PMCPMC3658600
OpenAlexW2125123270

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.