Evidence map›Paper›PMID 23724081›Full record

ArticlePloS one2013

Common evolutionary origin for the rotor domain of rotary ATPases and flagellar protein export apparatus.

Jun-ichi Kishikawa, Tatsuya Ibuki, Shuichi Nakamura, Astuko Nakanishi, Tohru Minamino, Tomoko Miyata, Keiichi Namba, Hiroki Konno, Hiroshi Ueno, Katsumi Imada and 1 more

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. FliIScientific reports · 2020
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Rotation of artificial rotor axles in rotary molecular motors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  9. Article
  10. Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. F-subunit reinforces torque generation in V-ATPase.European biophysics journal : EBJ · 2014
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jun-ichi KishikawaDepartment of Molecular Biosciences, Kyoto Sangyo University, Motoyama Kamigamo, Kita-ku, Kyoto, Japan.
Tatsuya Ibuki
Shuichi Nakamura
Astuko Nakanishi
Tohru Minamino
Tomoko Miyata
Keiichi Namba
Hiroki Konno
Hiroshi Ueno
Katsumi Imada
Ken Yokoyama

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The V1- and F1- rotary ATPases contain a rotor that rotates against a catalytic A3B3 or α3β3 stator. The rotor F(1-γ) or V1-DF is composed of both anti-parallel coiled coil and globular-loop parts. The bacterial flagellar type III export apparatus contains a V1/F1-like ATPase ring structure composed of FliI6 homo-hexamer and FliJ which adopts an anti-parallel coiled coil structure without the globular-loop part. Here we report that FliJ of Salmonella enterica serovar Typhimurium shows a rotor like function in Thermus thermophilus A3B3 based on both biochemical and structural analysis. Single molecular analysis indicates that an anti-parallel coiled-coil structure protein (FliJ structure protein) functions as a rotor in A3B3. A rotary ATPase possessing an F1-γ-like protein generated by fusion of the D and F subunits of V1 rotates, suggesting F(1-γ) could be the result of a fusion of the genes encoding two separate rotor subunits. Together with sequence comparison among the globular part proteins, the data strongly suggest that the rotor domains of the rotary ATPases and the flagellar export apparatus share a common evolutionary origin.

Indexed as

Evolution, MolecularAdenosine TriphosphatasesBacterial ProteinsCryoelectron MicroscopyFlagellaModels, MolecularProtein Structure, SecondaryProtein Structure, TertiaryProtein TransportSalmonella typhimuriumThermus thermophilusAdenosine TriphosphatasesBacterial ProteinsfliJ protein, Bacteria

Identifiers

PMID23724081
PMCPMC3665681

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.