Evidence map›Paper›PMID 23724058›Full record

ArticlePloS one2013

Phenethylisothiocyanate alters site- and promoter-specific histone tail modifications in cancer cells.

Yi Liu, Suvobrata Chakravarty, Moul Dey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yi LiuDepartment of Health & Nutritional Sciences, South Dakota State University, Brookings, South Dakota, United States of America.
Suvobrata Chakravarty
Moul Dey
South Dakota State University · US

Funding

An alternate therapy for treatment of IBD and prevention of colon cancerR00AT004245 · NCCIH · SOUTH DAKOTA STATE UNIVERSITY · PI DEY, MOUL · 2010 to 2012
$682k
NCCIH NIH HHS R00 AT004245NCCIH NIH HHS R00AT4245
6 · The paper itself

Abstract

Site-specific histone modifications are important epigenetic regulators of gene expression. As deregulation of genes often results in complex disorders, corrective modulation of site-specific histone marks could be a powerful therapeutic or disease-preventive strategy. However, such modulation by dietary compounds and the resulting impact on disease risk remain relatively unexplored. Here we examined phenethylisothiocyanate (PEITC), a common dietary compound derived from cruciferous vegetables with known chemopreventive properties under experimental conditions, as a possible modulator of histone modifications in human colon cancer cells. The present study reports novel, dynamic, site-specific chemical changes to histone H3 in a gene-promoter-specific manner, associated with PEITC exposure in human colon tumor-derived SW480 epithelial cells. In addition, PEITC attenuated cell proliferation in a concentration- and time-dependent manner, likely mediated by caspase-dependent apoptotic signalling. The effects of PEITC on histone modifications and gene expression changes were achieved at low, non-cytotoxic concentrations, in contrast to the higher concentrations necessary to halt cancer cell proliferation. Increased understanding of specific epigenetic alterations by dietary compounds may provide improved chemopreventive strategies for reducing the healthcare burden of cancer and other human diseases.

Indexed as

Promoter Regions, GeneticAcetylationApoptosisCell Line, TumorCell ProliferationChemokinesColonic NeoplasmsDNA FragmentationDose-Response Relationship, DrugDown-RegulationGene Expression Regulation, NeoplasticHistonesHumansIsothiocyanatesMatrix MetalloproteinasesMethylationChemokinesHistonesIsothiocyanatesMatrix Metalloproteinasesphenethyl isothiocyanateRNA, MessengerTranscription Factors

Identifiers

PMID23724058
PMCPMC3665791
OpenAlexW1964937451

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.