Evidence map›Paper›PMID 23724034›Full record

ArticlePloS one2013

Metabolomics analysis and biosynthesis of rosmarinic acid in Agastache rugosa Kuntze treated with methyl jasmonate.

Yeon Bok Kim, Jae Kwang Kim, Md Romij Uddin, Hui Xu, Woo Tae Park, Pham Anh Tuan, Xiaohua Li, Eunsook Chung, Jai-Heon Lee, Sang Un Park

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Expression Patterns and Functional Analysis of ThreeInternational journal of molecular sciences · 2023
    Article
  5. Review
  6. Article
  7. Plant elicitation and TiOPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  8. Elicitor-Induced Metabolomics Analysis ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Pharmacological Effects ofBiomolecules · 2020
    Article
  14. Production of phenolic acids in hairy root cultures of medicinal plantMolecular biology research communications · 2020
    Article
  15. Improving Phenolic Total Content and Monoterpene inInternational journal of molecular sciences · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Yeon Bok KimDepartment of Crop Science, Chungnam National University, Daejeon, Republic of Korea.
Jae Kwang Kim
Md Romij Uddin
Hui Xu
Woo Tae Park
Pham Anh Tuan
Xiaohua Li
Eunsook Chung
Jai-Heon Lee
Sang Un Park
Chungnam National University · KRDong-A University · KRInner Mongolia University for Nationalities · CNRural Development Administration · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigated the effect of methyl jasmonate (MeJA) on metabolic profiles and rosmarinic acid (RA) biosynthesis in cell cultures of Agastache rugosa Kuntze. Transcript levels of phenylpropanoid biosynthetic genes, i.e., ArPAL, Ar4CL, and ArC4H, maximally increased 4.5-fold, 3.4-fold, and 3.5-fold, respectively, compared with the untreated controls, and the culture contained relatively high amounts of RA after exposure of cells to 50 µM MeJA. RA levels were 2.1-, 4.7-, and 3.9-fold higher after exposure to 10, 50, and 100 µM MeJA, respectively, than those in untreated controls. In addition, the transcript levels of genes attained maximum levels at different time points after the initial exposure. The transcript levels of ArC4H and Ar4CL were transiently induced by MeJA, and reached a maximum of up to 8-fold at 3 hr and 6 hr, respectively. The relationships between primary metabolites and phenolic acids in cell cultures of A. rugosa treated with MeJA were analyzed by gas chromatography coupled with time-of-flight mass spectrometry. In total, 45 metabolites, including 41 primary metabolites and 4 phenolic acids, were identified from A. rugosa. Metabolite profiles were subjected to partial least square-discriminate analysis to evaluate the effects of MeJA. The results indicate that both phenolic acids and precursors for the phenylpropanoid biosynthetic pathway, such as aromatic amino acids and shikimate, were induced as a response to MeJA treatment. Therefore, MeJA appears to have an important impact on RA accumulation, and the increased RA accumulation in the treated cells might be due to activation of the phenylpropanoid genes ArPAL, ArC4H, and Ar4CL.

Indexed as

MetabolomicsAcetatesAgastacheBiosynthetic PathwaysCells, CulturedCinnamatesCyclopentanesDepsidesDiscriminant AnalysisGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantGenes, PlantLeast-Squares AnalysisOxylipinsPhenylpropionatesRNA, MessengerAcetatesCinnamatesCyclopentanesDepsidesmethyl jasmonateOxylipinsPhenylpropionatesRNA, MessengerRosmarinic AcidShikimic Acid

Identifiers

PMID23724034
PMCPMC3665811
OpenAlexW2056584820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.