Evidence map›Paper›PMID 23722854›Full record

ArticleActa crystallographica. Section F, Structural biology and crystallization communications2013

Crystallographic analysis of new psychrophilic haloalkane dehalogenases: DpcA from Psychrobacter cryohalolentis K5 and DmxA from Marinobacter sp. ELB17.

Katsiaryna Tratsiak, Oksana Degtjarik, Ivana Drienovska, Lukas Chrast, Pavlina Rezacova, Michal Kuty, Radka Chaloupkova, Jiri Damborsky, Ivana Kuta Smatanova

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology and crystallization communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Crystal structure of the cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5.Acta crystallographica. Section F, Structural biology communications · 2019
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Katsiaryna TratsiakFaculty of Fisheries and Protection of Waters, University of South Bohemia in Ceske Budejovice, CENAKVA and Institute of Complex Systems, Zamek 136, 373 33 Nove Hrady, Czech Republic.
Oksana Degtjarik
Ivana Drienovska
Lukas Chrast
Pavlina Rezacova
Michal Kuty
Radka Chaloupkova
Jiri Damborsky
Ivana Kuta Smatanova

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Haloalkane dehalogenases are hydrolytic enzymes with a broad range of potential practical applications such as biodegradation, biosensing, biocatalysis and cellular imaging. Two newly isolated psychrophilic haloalkane dehalogenases exhibiting interesting catalytic properties, DpcA from Psychrobacter cryohalolentis K5 and DmxA from Marinobacter sp. ELB17, were purified and used for crystallization experiments. After the optimization of crystallization conditions, crystals of diffraction quality were obtained. Diffraction data sets were collected for native enzymes and complexes with selected ligands such as 1-bromohexane and 1,2-dichloroethane to resolutions ranging from 1.05 to 2.49 Å.

Indexed as

Bacterial ProteinsCatalytic DomainCrystallography, X-RayHydrolasesMarinobacterPsychrobacterX-Ray DiffractionBacterial Proteinshaloalkane dehalogenaseHydrolasesDmxADpcAhaloalkane dehalogenasesMarinobacter sp. ELB17Psychrobacter cryohalolentis K5

Identifiers

PMID23722854
PMCPMC3668595

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.