Evidence map›Paper›PMID 23721917›Full record

ArticleBioorganic & medicinal chemistry2013

Caged oligonucleotides for bidirectional photomodulation of let-7 miRNA in zebrafish embryos.

Julianne C Griepenburg, Brittani K Ruble, Ivan J Dmochowski

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Optical Control of MicroRNA Function in Zebrafish Embryos.Journal of the American Chemical Society · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Conditionally Activated ("Caged") Oligonucleotides.Molecules (Basel, Switzerland) · 2021
    Review
  10. Article
  11. Caspase-Activated Oligonucleotide Probe.Bioconjugate chemistry · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Optochemical Control of Biological Processes in Cells and Animals.Angewandte Chemie (International ed. in English) · 2018
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Julianne C GriepenburgDepartment of Chemistry, University of Pennsylvania, 231 S. 34th Street, Philadelphia, PA 19104, USA.
Brittani K Ruble
Ivan J Dmochowski

Funding

Oligonucleotides for turning genes on and off with lightR01GM083030 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DMOCHOWSKI, IVAN JULIAN · 2008 to 2017
$3.0M
LEICA TCS SP2 AOBS UV CONFOCAL SYSTEM: EMBRYO DEVELOPMENTS10RR021113 · NCRR · UNIVERSITY OF PENNSYLVANIA · PI DMOCHOWSKI, IVAN JULIAN · 2005 to 2005
$497k
NCRR NIH HHS S10 RR021113NIGMS NIH HHS R01 GM083030
6 · The paper itself

Abstract

Many biological functions of microRNA (miRNA) have been identified in the past decade. However, a single miRNA can regulate multiple gene targets, thus it has been a challenge to elucidate the specific functions of each miRNA in different locations and times. New chemical tools make it possible to modulate miRNA activity with higher spatiotemporal resolution. Here, we describe light-activated (caged) constructs for switching let-7 miRNA 'on' or 'off' with 365 nm light in developing zebrafish embryos.

Indexed as

AnimalsEmbryo, NonmammalianMicroRNAsOligonucleotidesZebrafishMicroRNAsmirnlet7 microRNA, zebrafishOligonucleotidesAntagomirLet-7MicroRNA (miRNA)Zebrafish

Identifiers

PMID23721917
PMCPMC3789856

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.