Evidence map›Paper›PMID 23720809›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2013

Complete TCR-α gene locus control region activity in T cells derived in vitro from embryonic stem cells.

Armin Lahiji, Martina Kucerová-Levisohn, Jordana Lovett, Roxanne Holmes, Juan Carlos Zúñiga-Pflücker, Benjamin D Ortiz

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. T-cell receptor α enhancer is inactivated in αβ T lymphocytes.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  2. Article
  3. Derivation of T cells in vitro from mouse embryonic stem cells.Journal of visualized experiments : JoVE · 2014
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Armin LahijiDepartment of Biological Sciences, City University of New York, Hunter College, New York, NY 10065, USA.
Martina Kucerová-Levisohn
Jordana Lovett
Roxanne Holmes
Juan Carlos Zúñiga-Pflücker
Benjamin D Ortiz
The Graduate Center, CUNY · USSunnybrook Health Science Centre · CAHunter College · US

Funding

WILD TYPE &MUTANT P53 INTERACTIONS WITH HIV LTR DNAG12RR003037 · NCRR · HUNTER COLLEGE · PI DOTTIN, ROBERT P · 1985 to 2011
$27.6M
Basic and Translational Research Center for Reducing Health DisparitiesG12MD007599 · NIMHD · HUNTER COLLEGE · PI ANGULO, JESUS A · 2012 to 2017
$14.6M
Translating TCRa locus control region activity to T cell gene therapy vectorsSC1GM095402 · NIGMS · HUNTER COLLEGE · PI ORTIZ, BENJAMIN D., · 2011 to 2014
$1.2M
CIHRNCRR NIH HHS G12 RR003037NIGMS NIH HHS SC1 GM095402NIGMS NIH HHS SC1-GM095402NIMHD NIH HHS G12 MD007599
6 · The paper itself

Abstract

Locus control regions (LCRs) are cis-acting gene regulatory elements with the unique, integration site-independent ability to transfer the characteristics of their locus-of-origin's gene expression pattern to a linked transgene in mice. LCR activities have been discovered in numerous T cell lineage-expressed gene loci. These elements can be adapted to the design of stem cell gene therapy vectors that direct robust therapeutic gene expression to the T cell progeny of engineered stem cells. Currently, transgenic mice provide the only experimental approach that wholly supports all the critical aspects of LCR activity. In this study, we report the manifestation of all key features of mouse TCR-α gene LCR function in T cells derived in vitro from mouse embryonic stem cells. High-level, copy number-related TCR-α LCR-linked reporter gene expression levels are cell type restricted in this system, and upregulated during the expected stage transition of T cell development. We also report that de novo introduction of TCR-α LCR-linked transgenes into existing T cell lines yields incomplete LCR activity. These data indicate that establishing full TCR-α LCR activity requires critical molecular events occurring prior to final T lineage determination. This study also validates a novel, tractable, and more rapid approach for the study of LCR activity in T cells, and its translation to therapeutic genetic engineering.

Indexed as

AnimalsCell DifferentiationCell LineCell LineageCells, CulturedCoculture TechniquesEmbryonic Stem CellsGenes, ReporterLocus Control RegionMiceMice, TransgenicRandom AllocationReceptors, Antigen, T-Cell, alpha-betaT-Lymphocyte SubsetsReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID23720809
PMCPMC3755507
OpenAlexW2114219301

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.