Evidence map›Paper›PMID 23717213›Full record

ArticlePLoS genetics2013

Ikbkap/Elp1 deficiency causes male infertility by disrupting meiotic progression.

Fu-Jung Lin, Li Shen, Chuan-Wei Jang, Pål Ø Falnes, Yi Zhang

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  3. Article
  4. The life and times of a tRNA.RNA (New York, N.Y.) · 2023
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Genetic Association of the FunctionalJournal of personalized medicine · 2021
    Article
  10. Review
  11. Article
  12. Elongator Subunit 3 (Elp3) Is Required for Zebrafish Trunk Development.International journal of molecular sciences · 2020
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Structural insights into the function of Elongator.Cellular and molecular life sciences : CMLS · 2018
    Review
  18. Article
  19. Article
  20. Animal and cellular models of familial dysautonomia.Clinical autonomic research : official journal of the Clinical Autonomic Research Society · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Fu-Jung LinHoward Hughes Medical Institute, Harvard Medical School, Boston, MA, USA.
Li Shen
Chuan-Wei Jang
Pål Ø Falnes
Yi Zhang
Harvard University · USHoward Hughes Medical Institute · USUniversity of Oslo · NO

Funding

Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
Epigenetic and chemical approaches to generate function beta cellsU01DK089565 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ZHANG, YI · 2010 to 2014
$3.0M
Howard Hughes Medical InstituteNCI NIH HHS T32 CA009156NCI NIH HHS T32-CA009156-36NIDDK NIH HHS U01 DK089565NIDDK NIH HHS U01DK089565
6 · The paper itself

Abstract

Mouse Ikbkap gene encodes IKAP--one of the core subunits of Elongator--and is thought to be involved in transcription. However, the biological function of IKAP, particularly within the context of an animal model, remains poorly characterized. We used a loss-of-function approach in mice to demonstrate that Ikbkap is essential for meiosis during spermatogenesis. Absence of Ikbkap results in defects in synapsis and meiotic recombination, both of which result in increased apoptosis and complete arrest of gametogenesis. In Ikbkap-mutant testes, a few meiotic genes are down-regulated, suggesting IKAP's role in transcriptional regulation. In addition, Ikbkap-mutant testes exhibit defects in wobble uridine tRNA modification, supporting a conserved tRNA modification function from yeast to mammals. Thus, our study not only reveals a novel function of IKAP in meiosis, but also suggests that IKAP contributes to this process partly by exerting its effect on transcription and tRNA modification.

Indexed as

AnimalsCarrier ProteinsChromosome PairingGene Expression Regulation, DevelopmentalHumansInfertility, MaleIntracellular Signaling Peptides and ProteinsMaleMeiosisMiceRecombination, GeneticRNA, TransferSpermatogenesisCarrier ProteinsIkbkap protein, mouseIntracellular Signaling Peptides and ProteinsRNA, Transfer

Identifiers

PMID23717213
PMCPMC3662645
OpenAlexW2154319716

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.