Evidence map›Paper›PMID 23716688›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria.

Markus Sutter, Adjélé Wilson, Ryan L Leverenz, Rocio Lopez-Igual, Adrien Thurotte, Annette E Salmeen, Diana Kirilovsky, Cheryl A Kerfeld

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 100 citations in OpenAlex.

  1. Molecular Mechanisms ofPlants (Basel, Switzerland) · 2025
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  7. Integrated Structural Studies for Elucidating Carotenoid-Protein Interactions.Advances in experimental medicine and biology · 2022
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  11. Fluorescence recovery protein: a powerful yet underexplored regulator of photoprotection in cyanobacteria†.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Markus SutterUS Department of Energy, Joint Genome Institute, Walnut Creek, CA 94598, USA.
Adjélé Wilson
Ryan L Leverenz
Rocio Lopez-Igual
Adrien Thurotte
Annette E Salmeen
Diana Kirilovsky
Cheryl A Kerfeld
Institut de Biologie et Technologies · FRJoint Genome Institute · USUniversity of California, Berkeley · USCentre de Génétique Moléculaire · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Photosynthetic reaction centers are sensitive to high light conditions, which can cause damage because of the formation of reactive oxygen species. To prevent high-light induced damage, cyanobacteria have developed photoprotective mechanisms. One involves a photoactive carotenoid protein that decreases the transfer of excess energy to the reaction centers. This protein, the orange carotenoid protein (OCP), is present in most cyanobacterial strains; it is activated by high light conditions and able to dissipate excess energy at the site of the light-harvesting antennae, the phycobilisomes. Restoration of normal antenna capacity involves the fluorescence recovery protein (FRP). The FRP acts to dissociate the OCP from the phycobilisomes by accelerating the conversion of the active red OCP to the inactive orange form. We have determined the 3D crystal structure of the FRP at 2.5 Å resolution. Remarkably, the FRP is found in two very different conformational and oligomeric states in the same crystal. Based on amino acid conservation analysis, activity assays of FRP mutants, FRP:OCP docking simulations, and coimmunoprecipitation experiments, we conclude that the dimer is the active form. The second form, a tetramer, may be an inactive form of FRP. In addition, we have identified a surface patch of highly conserved residues and shown that those residues are essential to FRP activity.

Indexed as

LightBacterial ProteinsCatalytic DomainCrystallography, X-RayCyanobacteriaElectrophoresis, Polyacrylamide GelEnergy TransferModels, MolecularMutationPhycobilisomesProtein BindingProtein ConformationProtein MultimerizationProtein Structure, SecondaryProtein Structure, TertiarySynechocystisBacterial ProteinsPhycobilisomesnonphotochemical quenchingSynechocystis

Identifiers

PMID23716688
PMCPMC3683793
OpenAlexW2030100177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.