Evidence map›Paper›PMID 23712905›Full record

ArticleExtremophiles : life under extreme conditions2013

The DNA uptake ATPase PilF of Thermus thermophilus: a reexamination of the zinc content.

Ralf Salzer, Martin Herzberg, Dietrich H Nies, Goran Biuković, Gerhard Grüber, Volker Müller, Beate Averhoff

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Ralf SalzerMolecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University Frankfurt, Max-von-Laue-Str. 9, 60438 Frankfurt am Main, Germany.
Martin Herzberg
Dietrich H Nies
Goran Biuković
Gerhard Grüber
Volker Müller
Beate Averhoff
Goethe University Frankfurt · DEMartin Luther University Halle-Wittenberg · DENanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DNA-translocator ATPase PilF of Thermus thermophilus HB27 is a hexamer built by six identical subunits. Despite the presence of a conserved zinc-binding site in every subunit, only one zinc atom per hexamer was found. Re-examination of the zinc content of PilF purified from cells grown in complex media with different lots of yeast extract revealed six zinc atoms per hexamer. These data demonstrate that the low zinc content reported before was most likely a result of zinc depletion of the yeast extract used.

Indexed as

Bacterial ProteinsBinding SitesDNANucleobase, Nucleoside, Nucleotide, and Nucleic Acid Transport ProteinsProtein SubunitsThermus thermophilusZincBacterial ProteinsDNANucleobase, Nucleoside, Nucleotide, and Nucleic Acid Transport ProteinsProtein SubunitsZinc

Identifiers

PMID23712905
OpenAlexW2108222203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.