Evidence map›Paper›PMID 23711619›Full record

ArticleGene2013

Poly(ADP-ribose) glycohydrolase and poly(ADP-ribose)-interacting protein Hrp38 regulate pattern formation during Drosophila eye development.

Yingbiao Ji, Michael Jarnik, Alexei V Tulin

Open access · greenAbstract read
In one paragraph

Article in Gene, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yingbiao JiCancer Biology Program, Epigenetics and Progenitor Cell Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Michael Jarnik
Alexei V Tulin
Fox Chase Cancer Center · US

Funding

Poly ADP-ribose Polymerase in Chromatin and Transcriptional RegulationR01GM077452 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI TULIN, ALEXEI V · 2008 to 2012
$1.6M
NIGMS NIH HHS R01 GM077452
6 · The paper itself

Abstract

Drosophila Hrp38, a homolog of human hnRNP A1, has been shown to regulate splicing, but its function can be modified by poly(ADP-ribosyl)ation. Notwithstanding such findings, our understanding of the roles of poly(ADP-ribosyl)ated Hrp38 on development is limited. Here, we have demonstrated that Hrp38 is essential for fly eye development based on a rough-eye phenotype with disorganized ommatidia observed in adult escapers of the hrp38 mutant. We also observed that poly(ADP-ribose) glycohydrolase (Parg) loss-of-function, which caused increased Hrp38 poly(ADP-ribosyl)ation, also resulted in the rough-eye phenotype with disrupted ommatidial lattice and reduced number of photoreceptor cells. In addition, ectopic expression of DE-cadherin, which is required for retinal morphogenesis, fully rescued the rough-eye phenotype of the hrp38 mutant. Similarly, Parg mutant eye clones had decreased expression level of DE-cadherin with orientation defects, which is reminiscent of DE-cadherin mutant eye phenotype. Therefore, our results suggest that Hrp38 poly(ADP-ribosyl)ation controls eye pattern formation via regulation of DE-cadherin expression, a finding which has implications for understanding the pathogenic mechanisms of Hrp38-related Fragile X syndrome and PARP1-related retinal degeneration diseases.

Indexed as

AnimalsBody PatterningDrosophilaDrosophila ProteinsEyeGene ExpressionGlycoside HydrolasesHeterogeneous-Nuclear RibonucleoproteinsMutationPhenotypeRibonucleoproteinsDrosophila ProteinsGlycoside HydrolasesHeterogeneous-Nuclear RibonucleoproteinsHRB98DE protein, Drosophilapoly ADP-ribose glycohydrolaseRibonucleoproteins5′ untranslated region5′UTRDE-cadherindeficiencyDfDrosophilaDrosophila epithelial cadherinESEsESSsexonic splicing enhancersexonic splicing silencersEye developmentgermline stem cellGSCheterogeneous nuclear ribonucleoproteinshnRNP/HrpHrp38intronic splicing enhancersintronic splicing silencersISEsISSspADPrPARGPARP1Pattern formationpoly(ADP-ribose)poly(ADP-ribose) glycohydrolasepoly(ADP-ribose) polymerase 1poly(ADP-ribosyl)ationrd1retinal degeneration 1retinitis pigmentosaRPserine-arginine-rich proteinSR proteinUASupstream activation sequence

Identifiers

PMID23711619
PMCPMC3729623
OpenAlexW2078157139

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.