Evidence map›Paper›PMID 23711384›Full record

ArticleVirology2013

Encephalomyocarditis virus Leader protein hinge domain is responsible for interactions with Ran GTPase.

Valjean R Bacot-Davis, Ann C Palmenberg

Abstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Valjean R Bacot-DavisInstitute for Molecular Virology, University of Wisconsin-Madison, R.M. Bock Laboratories, 1525 Linden Dr. Madison, WI 53706, USA. bacotdavis@wisc.edu
Ann C Palmenberg
University of Wisconsin–Madison · US

Funding

GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
PROTEOLYTIC REGULATION OF PICORNAVIRAL MORPHOGENESISR01AI017331 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI PALMENBERG, ANN C. · 1985 to 2013
$3.7M
Virology Training ProgramT32AI078985 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI LAMBERT, PAUL F. · 2009 to 2018
$3.3M
Cardioviral Proteases and Comparative Genome StructureR56AI017331 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI PALMENBERG, ANN C. · 2007 to 2007
$364k
NIAID NIH HHS AI-17331NIAID NIH HHS R01 AI017331NIAID NIH HHS R56 AI017331NIAID NIH HHS T32 AI078985NIGMS NIH HHS T32 GM007215
6 · The paper itself

Abstract

Encephalomyocarditis virus (EMCV), a Cardiovirus, initiates its polyprotein with a short 67 amino acid Leader (L) sequence. The protein acts as a unique pathogenicity factor, with anti-host activities which include the triggering of nuclear pore complex hyperphosphorylation and direct binding inhibition of the active cellular transport protein, Ran GTPase. Chemical modifications and protein mutagenesis now map the Ran binding domain to the L hinge-linker region, and in particular, to amino acids 35-40. Large deletions affecting this region were shown previously to diminish Ran binding. New point mutations, especially K35Q, D37A and W40A, preserve the intact L structure, abolish Ran binding and are deficient for nucleoporin (Nup) hyperphosphorylation. Ran itself morphs through multiple configurations, but reacts most effectively with L when in the GDP format, preferably with an empty nucleotide binding pocket. Therefore, L:Ran binding, mediated by the linker-hinge, is a required step in L-induced nuclear transport inhibition.

Indexed as

Host-Pathogen InteractionsProtein Interaction MappingActive Transport, Cell NucleusAmino Acid SubstitutionEncephalomyocarditis virusHeLa CellsHumansModels, MolecularMutant ProteinsPoint MutationPolyproteinsProtein BindingProtein Conformationran GTP-Binding ProteinViral ProteinsMutant ProteinsPolyproteinsran GTP-Binding ProteinViral Proteins

Identifiers

PMID23711384
PMCPMC3724357
OpenAlexW2002253322

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.