Evidence map›Paper›PMID 23709621›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2013

Protein composition of bronchoalveolar lavage fluid and airway surface liquid from newborn pigs.

Jennifer A Bartlett, Matthew E Albertolle, Christine Wohlford-Lenane, Alejandro A Pezzulo, Joseph Zabner, Richard K Niles, Susan J Fisher, Paul B McCray, Katherine E Williams

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  7. Review
  8. Article
  9. Airway Surface Liquid Has Innate Antiviral Activity That Is Reduced in Cystic Fibrosis.American journal of respiratory cell and molecular biology · 2020
    Article
  10. Article
  11. Article
  12. Enolase FromFrontiers in immunology · 2019
    Article
  13. Article
  14. Article
  15. Extracellular Actin Is a Receptor forFrontiers in cellular and infection microbiology · 2018
    Article
  16. Aspf2 FromFrontiers in immunology · 2018
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jennifer A BartlettDepartment of Pediatrics, Carver College of Medicine, University of Iowa, Iowa City, IA, USA.
Matthew E Albertolle
Christine Wohlford-Lenane
Alejandro A Pezzulo
Joseph Zabner
Richard K Niles
Susan J Fisher
Paul B McCray
Katherine E Williams
University of Iowa · USUniversity of California, San Francisco · US

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Jong Sung Kim · 1990 to 2026
$40.5M
Respiratory virus infection in early cystic fibrosis lung diseaseP01HL091842 · NHLBI · UNIVERSITY OF IOWA · PI ZABNER, JOSEPH · 2008 to 2022
$34.2M
Xylitol Enhancement of Bacterial Killing by AirwayP50HL061234 · NHLBI · UNIVERSITY OF IOWA · PI WELSH, MICHAEL J. · 1998 to 2007
$13.6M
NHLBI NIH HHS P01 HL-091842NHLBI NIH HHS P01 HL091842NHLBI NIH HHS P50 HL061234NHLBI NIH HHS P50 HL-61234NIEHS NIH HHS P30 ES005605
6 · The paper itself

Abstract

The airway mucosa and the alveolar surface form dynamic interfaces between the lung and the external environment. The epithelial cells lining these barriers elaborate a thin liquid layer containing secreted peptides and proteins that contribute to host defense and other functions. The goal of this study was to develop and apply methods to define the proteome of porcine lung lining liquid, in part, by leveraging the wealth of information in the Sus scrofa database of Ensembl gene, transcript, and protein model predictions. We developed an optimized workflow for detection of secreted proteins in porcine bronchoalveolar lavage (BAL) fluid and in methacholine-induced tracheal secretions [airway surface liquid (ASL)]. We detected 674 and 3,858 unique porcine-specific proteins in BAL and ASL, respectively. This proteome was composed of proteins representing a diverse range of molecular classes and biological processes, including host defense, molecular transport, cell communication, cytoskeletal, and metabolic functions. Specifically, we detected a significant number of secreted proteins with known or predicted roles in innate and adaptive immunity, microbial killing, or other aspects of host defense. In greatly expanding the known proteome of the lung lining fluid in the pig, this study provides a valuable resource for future studies using this important animal model of pulmonary physiology and disease.

Indexed as

AnimalsAnimals, NewbornBody FluidsBronchoalveolar Lavage FluidDatabases, ProteinEpithelial CellsLungMass SpectrometryMethacholine ChlorideProteomeRespiratory MucosaSus scrofaTracheaMethacholine ChlorideProteomeairway surface liquidbronchoalveolar lavageporcine lungproteomics

Identifiers

PMID23709621
PMCPMC3743012
OpenAlexW2169637397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.