ReviewCurrent opinion in microbiology2013
Virome genomics: a tool for defining the human virome.
Review in Current opinion in microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
21 citing papers in PubMed, 41 citations in OpenAlex.
- Chlorovirus ATCV-1 is part of the human oropharyngeal virome and is associated with changes in cognitive functions in humans and mice.Proceedings of the National Academy of Sciences of the United States of America · 2014Trial
- Multi-kingdom metagenomic characterization of the gut bacteriome, mycobiome, and virome in chronic functional constipation.Frontiers in cellular and infection microbiology · 2026Article
- Plasma metagenomics reveals regional variations of emerging and re-emerging pathogens in Chinese blood donors with an emphasis on human parvovirus B19.One health (Amsterdam, Netherlands) · 2023Article
- Development of novel parameters for pathogen identification in clinical metagenomic next-generation sequencing.Frontiers in genetics · 2023Article
- Article
- The potential of metagenomic next-generation sequencing in diagnosis of spinal infection: a retrospective study.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2022Article
- The Role of Microbiome and Virome in Idiopathic Pulmonary Fibrosis.Biomedicines · 2021Review
- ViroMatch: A Computational Pipeline for the Detection of Viral Sequences from Complex Metagenomic Data.Microbiology resource announcements · 2021Article
- Classifying the Lifestyle of Metagenomically-Derived Phages Sequences Using Alignment-Free Methods.Frontiers in microbiology · 2020Article
- The Feasibility of Metagenomic Next-Generation Sequencing to Identify Pathogens Causing Tuberculous Meningitis in Cerebrospinal Fluid.Frontiers in microbiology · 2019Article
- Lower Airway Virology in Health and Disease-From Invaders to Symbionts.Medicina (Kaunas, Lithuania) · 2018Review
- Does the microbiome and virome contribute to myalgic encephalomyelitis/chronic fatigue syndrome?Clinical science (London, England : 1979) · 2018Review
- Understanding the Promises and Hurdles of Metagenomic Next-Generation Sequencing as a Diagnostic Tool for Infectious Diseases.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2018Review
- The Human Virome: Implications for Clinical Practice in Transplantation Medicine.Journal of clinical microbiology · 2017Review
- Invasions of Host-Associated Microbiome Networks.Advances in ecological research · 2017Article
- Reconciling evidence-based medicine and precision medicine in the era of big data: challenges and opportunities.Genome medicine · 2016Review
- Next-generation sequencing in neuropathologic diagnosis of infections of the nervous system.Neurology(R) neuroimmunology & neuroinflammation · 2016Article
- Whole-genome sequencing targets drug-resistant bacterial infections.Human genomics · 2015Review
- Viruses and disease: emerging concepts for prevention, diagnosis and treatment.The Journal of pathology · 2015Article
- The relationships between environmental bacterial exposure, airway bacterial colonization, and asthma.Current opinion in allergy and clinical immunology · 2014Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
Abstract
High throughput, deep sequencing assays are powerful tools for gaining insights into virus-host interactions. Sequencing assays can discover novel viruses and describe the genomes of novel and known viruses. Genomic information can predict viral proteins that can be characterized, describe important genes in the host that control infections, and evaluate gene expression of viruses and hosts during infection. Sequencing can also describe variation and evolution of viruses during replication and transmission. This review recounts some of the major advances in the studies of virus-host interactions from the last two years, and discusses the uses of sequencing technologies relating to these studies.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.