Evidence map›Paper›PMID 23706822›Full record

ArticleMolecular cell2013

RPA coordinates DNA end resection and prevents formation of DNA hairpins.

Huan Chen, Michael Lisby, Lorraine S Symington

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 178 papers.

0numbers the graph read from it
0cells of the map it votes in
178citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

178 citing papers in PubMed, 272 citations in OpenAlex.

  1. Article
  2. Article
  3. The Role of Arp2/3 in End-Resection During DNA Double-Strand Break Repair.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  4. Article
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  13. Review
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  18. DNA repair and anti-cancer mechanisms in the long-lived bowhead whale.bioRxiv : the preprint server for biology · 2024
    Article
  19. Article
  20. Review

118 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Huan ChenDepartment of Biological Sciences, Columbia University, New York, NY 10027, USA.
Michael Lisby
Lorraine S Symington
Columbia University · USUniversity of Copenhagen · DK

Funding

Mechanisms of Homologous Recombination in YeastR01GM041784 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SYMINGTON, LORRAINE S · 1989 to 2017
$7.8M
European Research Council 242905NIGMS NIH HHS GM041784NIGMS NIH HHS R01 GM041784
6 · The paper itself

Abstract

Replication protein A (RPA) is an essential eukaryotic single-stranded DNA binding protein with a central role in DNA metabolism. RPA directly participates in DNA double-strand break repair by stimulating 5'-3' end resection by the Sgs1/BLM helicase and Dna2 endonuclease in vitro. Here we investigated the role of RPA in end resection in vivo, using a heat-inducible degron system that allows rapid conditional depletion of RPA in Saccharomyces cerevisiae. We found that RPA depletion eliminated both the Sgs1-Dna2- and Exo1-dependent extensive resection pathways and synergized with mre11Δ to prevent end resection. The short single-stranded DNA tails formed in the absence of RPA were unstable due to 3' strand loss and the formation of fold-back hairpin structures that required resection initiation and Pol32-dependent DNA synthesis. Thus, RPA is required to generate ssDNA, and also to protect ssDNA from degradation and inappropriate annealing that could lead to genome rearrangements.

Indexed as

Blotting, WesternDNA Breaks, Double-StrandedDNA-Directed DNA PolymeraseDNA, FungalDNA HelicasesDNA RepairDNA, Single-StrandedEndodeoxyribonucleasesExodeoxyribonucleasesLuminescent ProteinsMicroscopy, FluorescenceModels, GeneticMutationNucleic Acid ConformationProtein BindingRad51 RecombinaseDNA2 protein, S cerevisiaeDNA-Directed DNA PolymeraseDNA, FungalDNA HelicasesDNA, Single-StrandedEndodeoxyribonucleasesexodeoxyribonuclease IExodeoxyribonucleasesLuminescent ProteinsMRE11 protein, S cerevisiaePol32 protein, S cerevisiaeRAD51 protein, S cerevisiaeRad51 RecombinaseRecQ HelicasesReplication Protein ARFA1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiae

Identifiers

PMID23706822
PMCPMC3855855
OpenAlexW2138076097

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.