Evidence map›Paper›PMID 23701636›Full record

ArticleJournal of the American Chemical Society2013

Redox-based control of the transformation and activation of siRNA complexes in extracellular environments using ferrocenyl lipids.

Burcu S Aytar, John P E Muller, Yukishige Kondo, Yeshayahu Talmon, Nicholas L Abbott, David M Lynn

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 18 citations in OpenAlex.

  1. Self-organization of Nucleic Acids in Lipid Constructs.Current opinion in colloid & interface science · 2016
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Burcu S AytarDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
John P E Muller
Yukishige Kondo
Yeshayahu Talmon
Nicholas L Abbott
David M Lynn
University of Wisconsin–Madison · USTechnion – Israel Institute of Technology · ILTokyo Medical University · JP

Funding

Controlled Release of DNA from SurfacesR01EB006820 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI LYNN, DAVID M · 2008 to 2011
$1.3M
Spatial and Temporal Control of Transfection Using Ferrocene-Containing LipidsR21EB006168 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI LYNN, DAVID M · 2007 to 2008
$387k
NIBIB NIH HHS R01 EB006820NIBIB NIH HHS R21 EB006168
6 · The paper itself

Abstract

We report physical characterization and biological evaluation of complexes of small interfering RNA (siRNA) formed using a cationic lipid [bis(11-ferrocenylundecyl)dimethylammonium bromide (BFDMA)] containing redox-active ferrocenyl groups at the end of each hydrophobic tail. We demonstrate that control over the redox state of BFDMA can be used to influence key physical properties and control the activities of lipoplexes formed using siRNA-based constructs. Specifically, lipoplexes of siRNA and reduced BFDMA lead to high levels of sequence-specific gene silencing in cells, but lipoplexes formed using oxidized BFDMA do not. Lipoplexes of oxidized BFDMA can be activated in situ to induce high levels of silencing by addition of a chemical reducing agent, demonstrating a basis for external control over the activation/delivery of siRNA in cellular environments. Differences in activity arise from the inability of oxidized BFDMA to promote efficient internalization of siRNA; these differences also correlated to significant differences in the nanostructures of these lipoplexes (determined by cryo-TEM) and their ζ potentials as a function of oxidation state. These results are considered in view of recent studies characterizing the nanostructures, properties, and behaviors of lipoplexes formed using BFDMA and macromolecular plasmid DNA. We find that several key structural features and aspects of redox control observed for lipoplexes of plasmid DNA are maintained in complexes formed using smaller and more rigid siRNA. The ability to transform BFDMA in complex media presents opportunities to exert control over the nanostructures and behaviors of siRNA lipoplexes in ways not possible using conventional lipids. The approaches reported here could thus prove useful in both fundamental and applied contexts.

Indexed as

RNA InterferenceAnimalsChlorocebus aethiopsCOS CellsFerrous CompoundsLuciferasesOxidation-ReductionRNA, Small Interferingbis-(11-ferrocenylundecyl)dimethylammonium bromideFerrous CompoundsLuciferasesRNA, Small Interfering

Identifiers

PMID23701636
PMCPMC3713503
OpenAlexW2121483023

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.