Evidence map›Paper›PMID 23700042›Full record

ArticleInternational urogynecology journal2013

Estrogen-related genome-based expression profiling study of uterosacral ligaments in women with pelvic organ prolapse.

Yeo Jung Moon, Sang Wook Bai, Chan-Young Jung, Chul Hoon Kim

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in International urogynecology journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Advances in molecular mechanisms of pelvic organ prolapse (Review).Experimental and therapeutic medicine · 2021
    Review
  7. Article
  8. Identification of Differentially Expressed Genes in Pelvic Organ Prolapse by RNA-Seq.Medical science monitor : international medical journal of experimental and clinical research · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yeo Jung MoonDepartment of Obstetrics and Gynecology, Institute of Women's Life Medical Science, Yonsei University College of Medicine, Seonsan-ro 250, Seodaemun-gu, Seoul, Korea, 120-749.
Sang Wook Bai
Chan-Young Jung
Chul Hoon Kim
Yonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introduction and hypothesisThe aim of the study was to identify the differential expression of estrogen-related genes that may be involved in the menopause and pelvic organ prolapse (POP) using microarray analysis.

methodsAn age, parity, and menopausal status-matched case-control study with 12 POP patients and 5 non-POP patients was carried out. The study was conducted from January to December 2010 at Yonsei University, Severance Hospital. We examined microarray gene expression profiles in uterosacral ligaments (USLs) from POP and non-POP patients. Total RNA was extracted from USL samples to generate labeled cDNA, which was hybridized to microarrays and analyzed for the expression of 44,049 genes. We identified differentially expressed genes and performed functional clustering. After clustering, we focused on transcriptional response and signal transduction gene clusters, which are associated with estrogen, and then validated the changes of gene expression levels observed with the microarray analysis using quantitative polymerase chain reaction (qPCR).

resultsThe data from the microarray analysis using more than a 1.5-fold change with p value <0.05 resulted in 143 upregulated genes and 87 downregulated genes. Of 59 genes identified to be associated with signal transduction and transcription, 4 genes were chosen for qPCR that have been classified to be associated with estrogen. We found that estrogen receptor-related receptor-α (ERRα) was downregulated and that the expression of death-associated protein kinase 2 (DAPK 2), signal-transducing adaptor protein-2 (STAP-2), and interleukin (IL)-15 were upregulated.

conclusionsWe found four differentially expressed genes by microarray analysis that may account for the way in which changes in estrogen level affect POP pathophysiology.

Indexed as

Adaptor Proteins, Signal TransducingAgedCase-Control StudiesDeath-Associated Protein KinasesERRalpha Estrogen-Related ReceptorEstrogensFemaleGene Expression ProfilingHumansInterleukin-15LigamentsMenopauseMiddle AgedMultigene FamilyOligonucleotide Array Sequence AnalysisPelvic Organ ProlapseAdaptor Proteins, Signal TransducingDAPK2 protein, humanDeath-Associated Protein KinasesERRalpha Estrogen-Related ReceptorEstrogensIL15 protein, humanInterleukin-15PhosphoproteinsReceptors, EstrogenSTAP2 protein, human

Identifiers

PMID23700042
OpenAlexW1969125970

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.