Evidence map›Paper›PMID 23698628›Full record

ArticleJournal of experimental botany2013

Graft union formation in grapevine induces transcriptional changes related to cell wall modification, wounding, hormone signalling, and secondary metabolism.

Sarah Jane Cookson, Maria José Clemente Moreno, Cyril Hevin, Larissa Zita Nyamba Mendome, Serge Delrot, Claudine Trossat-Magnin, Nathalie Ollat

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 180 citations in OpenAlex.

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  19. Scion-to-Rootstock Mobile Transcription FactorInternational journal of molecular sciences · 2022
    Article
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sarah Jane CooksonINRA, ISVV, EGFV, UMR 1287, F-33140 Villenave d'Ornon, France. sarah.cookson@bordeaux.inra.fr
Maria José Clemente Moreno
Cyril Hevin
Larissa Zita Nyamba Mendome
Serge Delrot
Claudine Trossat-Magnin
Nathalie Ollat
Ecophysiologie et Génomique Fonctionnelle de la Vigne · FRUnité mixte de recherche Œnologie · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grafting is particularly important to the cultivation of perennial crops such as grapevine (Vitis vinifera) because rootstocks can provide resistance to soil-borne pests and diseases as well as improve tolerance to some abiotic stresses. Successful grafting is a complex biochemical and structural process beginning with the adhesion of the two grafted partners, followed by callus formation and the establishment of a functional vascular system. At the molecular level, the sequence of events underlying graft union formation remains largely uncharacterized. The present study investigates the transcriptome of grapevine rootstock and graft interface tissues sampled 3 d and 28 d after grafting of over-wintering stems in the spring. Many genes were differentially expressed over time, from 3 d to 28 d after grafting, which could be related to the activation of stem growth and metabolic activity in the spring. This hypothesis is supported by the up-regulation of many genes associated with cell wall synthesis, and phloem and xylem development. Generally, there was an up-regulation of gene expression in the graft interface tissue compared with the rootstock, particularly genes involved in cell wall synthesis, secondary metabolism, and signalling. Although there was overlap between the genes differentially expressed over time (from 3 d to 28 d after grafting) with the gene differentially expressed between the rootstock and the graft interface, numerous graft interface-specific genes were identified.

Indexed as

Gene Expression ProfilingSecondary MetabolismBotanyCell WallGene Expression Regulation, PlantPlant Growth RegulatorsPlant ProteinsSignal TransductionVitisPlant Growth RegulatorsPlant ProteinsGene expressiongraftinggrapevineperennial plantspringstem.

Identifiers

PMID23698628
PMCPMC3741690
OpenAlexW2159135517

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.