Evidence map›Paper›PMID 23692258›Full record

ArticleThe journal of physical chemistry. A2013

Modulated fluorophore signal recovery buried within tissue mimicking phantoms.

Saugata Sarkar, Chaoyang Fan, Jung-Cheng Hsiang, Robert M Dickson

Abstract readValidation Study
In one paragraph

Article in The journal of physical chemistry. A, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Saugata SarkarPetit Institute of Bioengineering and Bioscience, School of Chemistry & Biochemistry, Georgia Institute of Technology , 901 Atlantic Drive, Atlanta, Georgia 30332-0400, United States.
Chaoyang Fan
Jung-Cheng Hsiang
Robert M Dickson

Funding

Multifunctional fluorogenic Ag nanodots for dynamic intracellular single moleculeR01GM086195 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI DICKSON, ROBERT M · 2008 to 2011
$2.6M
NIGMS NIH HHS R01 GM086195
6 · The paper itself

Abstract

Optically modulated fluorescence from ∼140 nM Cy5 is visualized when embedded up to 6 mm within skin tissue mimicking phantoms, even in the presence of overwhelming background fluorescence and scatter. Experimental and finite element analysis (FEA)-based computational models yield excellent agreement in signal levels and predict biocompatible temperature changes. Using synchronously amplified fluorescence image recovery (SAFIRe), dual-laser excitation (primary laser: λ = 594 nm, 0.29 kW/cm(2); secondary laser: λ = 710 nm, 5.9 kW/cm(2), intensity-modulated at 100 Hz) simultaneously excites fluorescence and dynamically optically reverses the dark state buildup of primary laser-excited Cy5 molecules. As the modulated secondary laser both directly modulates Cy5 emission and is of lower energy than the collected Cy5 fluorescence, modulated Cy5 fluorescence in phantoms is free of obscuring background emission. The modulated fluorescence emission due to the secondary laser was recovered by Fourier transformation, yielding a specific and unique signature of the introduced fluorophores, with largely background-free detection, at excitation intensities close to the maximum permissible exposure (MPE) for skin. Experimental and computational models agree to within 8%, validating the computational model. As modulated fluorescence depends on the presence of both lasers, depth information as a function of focal position is also readily obtained from recovered modulated signal strength.

Indexed as

FluorescencePhantoms, ImagingAlginatesAlgorithmsCarbocyaninesComputer SimulationFinite Element AnalysisFluorescent DyesFourier AnalysisGlucuronic AcidHexuronic AcidsHumansLasersMicroscopy, FluorescenceOptics and PhotonicsPolystyrenesAlginatesCarbocyaninescyanine dye 5Fluorescent DyesGlucuronic AcidHexuronic AcidsPolystyrenesTalcTexas redXanthenes

Identifiers

PMID23692258
PMCPMC3865162

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.