Evidence map›Paper›PMID 23690406›Full record

ArticleInfection and immunity2013

Binding of Pk-trisaccharide analogs of globotriaosylceramide to Shiga toxin variants.

Hailemichael O Yosief, Suri S Iyer, Alison A Weiss

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Hailemichael O YosiefUniversity of Cincinnati, Department of Chemistry, Cincinnati, Ohio, USA.
Suri S Iyer
Alison A Weiss
University of Cincinnati · USGeorgia State University · US

Funding

Glycoconjugate based diagnostics for bacterial toxinsU01AI075498 · NIAID · UNIVERSITY OF CINCINNATI · PI WEISS, ALISON A. · 2007 to 2011
$2.0M
Shiga Toxin Production and Role in PathogenesisR01AI064893 · NIAID · UNIVERSITY OF CINCINNATI · PI WEISS, ALISON A. · 2007 to 2011
$1.9M
NIAID NIH HHS R01 AI064893NIAID NIH HHS U01 AI 075498NIAID NIH HHS U01 AI075498PHS HHS R01 AL064893
6 · The paper itself

Abstract

The two major forms of Shiga toxin, Stx1 and Stx2, use the glycolipid globotriaosylceramide (Gb3) as their cellular receptor. Stx1 primarily recognizes the Pk-trisaccharide portion and has three Pk binding sites per B monomer. The Stx2a subtype requires glycolipid residues in addition to Pk. We synthesized analogs of Pk to examine the binding preferences of Stx1 and Stx2 subtypes a to d. Furthermore, to determine how many binding sites must be engaged, the Pk analogues were conjugated to biotinylated mono- and biantennary platforms, allowing for the display of two to four Pk analogues per streptavidin molecule. Stx binding to Pk analogues immobilized on streptavidin-coated plates was assessed by enzyme-linked immunosorbent assay (ELISA). Stx1, but not the Stx2 subtypes, bound to native Pk. Stx2a and Stx2c bound to the Pk analog with a terminal GalNAc (NAc-Pk), while Stx1, Stx2b, and Stx2d did not bind to this analog. Interestingly, the purified Stx2d B subunit bound to NAc-Pk, suggesting that the A subunit of Stx2d interferes with binding. Disaccharide analogs (Galα1-4Gal, GalNAcα1-4Gal, and Galα1-4GalNAc) did not support the binding of any of the Stx forms, indicating that the trisaccharide is necessary for binding. Studies with monoantennary and biantennary analogs and mixtures suggest that Stx1, Stx2a, and Stx2c need to engage at least three Pk analogues for effective binding. To our knowledge, this is the first study examining the minimum number of Pk analogs required for effective binding and the first report documenting the role of the A subunit in influencing Stx2 binding.

Indexed as

Amino Acid SequenceBlotting, WesternElectrophoresis, Polyacrylamide GelEnzyme-Linked Immunosorbent AssayMolecular Sequence DataProtein BindingShiga ToxinsTrihexosylceramidesTrisaccharidesglobotriaosylceramideShiga ToxinsTrihexosylceramidesTrisaccharides

Identifiers

PMID23690406
PMCPMC3719591
OpenAlexW2159945972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.