Evidence map›Paper›PMID 23690138›Full record

ArticleMolecular and cellular biochemistry2013

Altered methylation of IGF2 DMR0 is associated with neural tube defects.

Lihua Wu, Li Wang, Shaofang Shangguan, Shaoyan Chang, Zhen Wang, Xiaolin Lu, Qin Zhang, Jianhua Wang, Huizhi Zhao, Fang Wang and 4 more

Abstract read
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In one paragraph

Article in Molecular and cellular biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

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  16. Methylome analysis for spina bifida showsClinical epigenetics · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Lihua WuBeijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, No. 2, Yabao Road, Chao Yang District, Beijing 100020, People's Republic of China.
Li Wang
Shaofang Shangguan
Shaoyan Chang
Zhen Wang
Xiaolin Lu
Qin Zhang
Jianhua Wang
Huizhi Zhao
Fang Wang
Jin Guo
Bo Niu
Jingzhu Guo
Ting Zhang
Capital Institute of Pediatrics · CNPeking University People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neural tube defects (NTDs) are serious congenital malformation of fusion failure of the neural tube during early embryogenesis. DNA methylation disorders have been found in NTD-affected fetuses, and are correlated to the risk of NTDs. The insulin-like growth factor 2 (IGF2) gene, maternally imprinted, has a key role in fetal development. IGF2 transcription is partly controlled by differentially methylated regions (DMRs) 0 and 2. To assess whether disturbed methylation pattern increases the incidence of NTDs, we employed matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) to quantify CpG methylation levels of DMR2 and 0 in fetuses with or without NTDs. We found that the methylation level of IGF2 DMR0 increased significantly in the brain tissues of NTD-affected fetuses. And hypermethylation of DMR0 was associated with an increased risk of NTDs, with an odds ratio of 5.375 (95 % CI: 1.447-19.965; p = 0.007). IGF2 mRNA expression was negatively correlated with the methylation level of DMR0 (R (2) = 0.893; p = 0.000) in HCT15 cells. These results highlights that IGF2 DMR0 hypermethylation is a potential risk factor of NTD, and IGF2 gene is a promising candidate gene to study for a greater understanding of the cause of NTDs.

Indexed as

DNA MethylationBase SequenceBrainCell Line, TumorCpG IslandsFemaleFetusGestational AgeHumansInsulin-Like Growth Factor IILungMaleMolecular Sequence DataNeural Tube DefectsPlacentaPolymerase Chain ReactionInsulin-Like Growth Factor II

Identifiers

PMID23690138
OpenAlexW1981364762

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.