Evidence map›Paper›PMID 23689940›Full record

ArticleCurrent microbiology2013

Proteomic analysis of protein expression in the induction of the viable but Nonculturable State of Vibrio harveyi SF1.

Juntao Jia, Zhengyi Li, Jijuan Cao, Yinghui Jiang, Chengzhu Liang, Mengzhen Liu

Abstract read
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Article in Current microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Juntao JiaThe Food and Agricultural Products Testing Agency, Shandong Entry-exit Inspection and Quarantine Bureau of China, Qingdao 266002, China.
Zhengyi Li
Jijuan Cao
Yinghui Jiang
Chengzhu Liang
Mengzhen Liu
Shandong Entry-Exit Inspection and Quarantine Bureau · CNUniversity of Michigan–Ann Arbor · USZhejiang Entry-Exit Inspection and Quarantine Bureau · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio harveyi has been reported to enter into a viable but nonculturable (VBNC) state. One marine V. harveyi strain, SF1 became nonculturable when incubated in seawater microcosm at 4 °C within 60 days. We investigated protein expression in the exponential phase of V. harveyi SF1 and compared it to the VBNC state. Cytosolic proteins were resolved by two-dimensional polyacrylamide gel electrophoresis using pH 4-7 linear gradients. Among these proteins, sixteen proteins which were strongly downregulated or upregulated in the VBNC cells were identified by MALDI-TOF-TOF mass spectrometry. The results indicated that the differentially expressed proteins were mainly focused on stress response proteins and key components of central and intermediary metabolism, like carbohydrate metabolism, transport, and translation. This study provided clues for understanding the mechanism of adaptation to the VBNC state.

Indexed as

ProteomicsAnimalsBacterial ProteinsColony Count, MicrobialCulture MediaElectrophoresis, Gel, Two-DimensionalFish DiseasesGene Expression Regulation, BacterialMass SpectrometryMicrobial ViabilityMolecular Sequence DataPerciformesVibrioVibrio InfectionsBacterial ProteinsCulture Media

Identifiers

PMID23689940
OpenAlexW2059809195

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.